RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 VTI1AQ96AJ9 217 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 DDAH1O94760 285 aa13.77□□□□□ -0.2
PTPRK-203ENST00000368207 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.2
PTPRK-203ENST00000368207 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.2
PTPRK-203ENST00000368207 ADAMTS13Q76LX8 1427 aa13.77□□□□□ -0.2
PTPRK-203ENST00000368207 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.21
PTPRK-203ENST00000368207 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-203ENST00000368207 A0A087WWV3 80 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 CYP2E1P05181 493 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-203ENST00000368207 MECOMQ03112 1051 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SLFN13Q68D06 897 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 CRB1P82279 1406 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 ZBED4O75132 1171 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 NR5A1Q13285 461 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 STRBPQ96SI9 672 aaKnown RBP13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SOS2Q07890 1332 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-203ENST00000368207 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 H7C1D1 291 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 RHOXF2BP0C7M4 288 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 BIRC3Q13489 604 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 RHOXF2Q9BQY4 288 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 MYO3AQ8NEV4 1616 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 GOLGA6L10A0A0M3HER8 536 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 CELF1Q92879 486 aaKnown RBP13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SELENOOQ9BVL4 669 aa13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
PTPRK-203ENST00000368207 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
PTPRK-203ENST00000368207 RXRBP28702 533 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PRR16Q569H4 304 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 TUBB4AP04350 444 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 MMP10P09238 476 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 GRAPQ13588 217 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 MYCT1Q8N699 235 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 GRAPLQ8TC17 118 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 GOLGA1Q92805 767 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
PTPRK-203ENST00000368207 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 ALAS1P13196 640 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PRDX5P30044 214 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 GINS2Q9Y248 185 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
PTPRK-203ENST00000368207 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 OR52Z1P0C646 297 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 PCDHA5Q9Y5H7 936 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTPRK-203ENST00000368207 ABCB5Q2M3G0 1257 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 LAMC1P11047 1609 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 GCNT3O95395 438 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 SMTNP53814 917 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-203ENST00000368207 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
PTPRK-203ENST00000368207 MINPP1Q9UNW1 487 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 SHTN1A0MZ66 631 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 GAS7O60861 476 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 RAD17O75943 681 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 CSRNP1Q96S65 589 aa13.74□□□□□ -0.21
PTPRK-203ENST00000368207 AFF2P51816 1311 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 FMNL1O95466 1100 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-203ENST00000368207 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■■■■■ 27.7
PTPRK-203ENST00000368207 ADKP55263 362 aaKnown RBP13.73□□□□□ -0.21
PTPRK-203ENST00000368207 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
PTPRK-203ENST00000368207 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 COL15A1P39059 1388 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 SLC16A2P36021 539 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 LRMPQ12912 555 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 PIK3C2BO00750 1634 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 GDF11O95390 407 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 IFNAR1P17181 557 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms