RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
SNHG28-201ENST00000368102 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
SNHG28-201ENST00000368102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNHG28-201ENST00000368102 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
SNHG28-201ENST00000368102 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 GRAPQ13588 217 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SNHG28-201ENST00000368102 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 FAM237AA0A1B0GTK4 181 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 NMT2O60551 498 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 CYP2D6P10635 497 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
SNHG28-201ENST00000368102 AKAP17AQ02040 695 aaKnown RBP16.03■□□□□ 0.16
SNHG28-201ENST00000368102 TROAPQ12815 778 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 POSTNQ15063 836 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 RILPL1Q5EBL4 403 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 DZIP1Q86YF9 867 aaKnown RBP16.03■□□□□ 0.16
SNHG28-201ENST00000368102 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 STAMQ92783 540 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
SNHG28-201ENST00000368102 SAMSN1Q9NSI8 373 aaKnown RBP16.03■□□□□ 0.16
SNHG28-201ENST00000368102 FUT2Q10981 343 aa16.02■□□□□ 0.16
SNHG28-201ENST00000368102 OLFM4Q6UX06 510 aa16.02■□□□□ 0.16
SNHG28-201ENST00000368102 SMYD4Q8IYR2 804 aaPredicted RBP16.02■□□□□ 0.16
SNHG28-201ENST00000368102 BBXQ8WY36 941 aaPredicted RBP16.02■□□□□ 0.16
SNHG28-201ENST00000368102 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
SNHG28-201ENST00000368102 DNAI1Q9UI46 699 aa16.02■□□□□ 0.16
SNHG28-201ENST00000368102 ORC4O43929 436 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 PNMA6AP0CW24 399 aaPredicted RBP16.02■□□□□ 0.15
SNHG28-201ENST00000368102 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.15
SNHG28-201ENST00000368102 AFMP43652 599 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 ETF1P62495 437 aaKnown RBP16.02■□□□□ 0.15
SNHG28-201ENST00000368102 PKN1Q16512 942 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 FAM47AQ5JRC9 791 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 VSTM4Q8IW00 320 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.15
SNHG28-201ENST00000368102 ATP8B1O43520 1251 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 TPM1P09493 284 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 PTPREP23469 700 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 STX17P56962 302 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 TRIM37O94972 964 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 SBK1Q52WX2 424 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 KLHL10Q6JEL2 608 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 DHX58Q96C10 678 aa16.01■□□□□ 0.15
SNHG28-201ENST00000368102 RBM28Q9NW13 759 aaKnown RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
SNHG28-201ENST00000368102 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 CALM1P0DP23 149 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 CALM2P0DP24 149 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 CALM3P0DP25 149 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 SLC20A2Q08357 652 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 TMEM139Q8IV31 216 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 EPC1Q9H2F5 836 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 MCM9Q9NXL9 1143 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 ACTN4O43707 911 aaKnown RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 LDHBP07195 334 aaKnown RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 XBP1P17861 261 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 PLA2G4AP47712 749 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 TEX35Q5T0J7 233 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 FBXO41Q8TF61 875 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 UBXN4Q92575 508 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
SNHG28-201ENST00000368102 DESI2Q9BSY9 194 aa16■□□□□ 0.15
SNHG28-201ENST00000368102 A0A0U1RQJ8 604 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 ERICH4A6NGS2 130 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 TULP2O00295 520 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 ZBTB22O15209 634 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 ONECUT3O60422 494 aaPredicted RBP15.99■□□□□ 0.15
SNHG28-201ENST00000368102 DDAH1O94760 285 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 REXO1L1PQ8IX06 675 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 XDHP47989 1333 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 LY75O60449 1722 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 MTF1Q14872 753 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 PHF20Q9BVI0 1012 aa15.99■□□□□ 0.15
SNHG28-201ENST00000368102 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.99■□□□□ 0.15
SNHG28-201ENST00000368102 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
SNHG28-201ENST00000368102 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
SNHG28-201ENST00000368102 CDK11BP21127 795 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms