RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 NFKBIEO00221 500 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 DTNBO60941 627 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 PRDM1O75626 825 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 CLCN1P35523 988 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 IRF5Q13568 498 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 RRP12Q5JTH9 1297 aaKnown RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 ATL3Q6DD88 541 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 MCTP1Q6DN14 999 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 CRACR2BQ8N4Y2 399 aaPredicted RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 AGBL3Q8NEM8 1001 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 GPT2Q8TD30 523 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 TMC2Q8TDI7 906 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
ATF3-203ENST00000366981 RNF26Q9BY78 433 aaPredicted RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 DHX36Q9H2U1 1008 aaKnown RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 ZNF287Q9HBT7 754 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 RBM28Q9NW13 759 aaKnown RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 ORC3Q9UBD5 711 aaPredicted RBP8.56□□□□□ -1.04
ATF3-203ENST00000366981 FAM198AQ9UFP1 575 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 SWAP70Q9UH65 585 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 METRNQ9UJH8 293 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 ZNRF3Q9ULT6 936 aa8.56□□□□□ -1.04
ATF3-203ENST00000366981 BAZ2BQ9UIF8 2168 aaKnown RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 ATAD5Q96QE3 1844 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 VPS37CA5D8V6 355 aaPredicted RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 G3V3G9 751 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 PSMD14O00487 310 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 PRPF3O43395 683 aaKnown RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 ENTPD3O75355 529 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 POLR3DP05423 398 aaPredicted RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 SHMT1P34896 483 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 SCNN1DP51172 638 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 TFAP4Q01664 338 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 NFIAQ12857 509 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 RTN1Q16799 776 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 FAM47AQ5JRC9 791 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 IFIT1BQ5T764 474 aaKnown RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 FKBP1CQ5VVH2 108 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
ATF3-203ENST00000366981 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 USP48Q86UV5 1035 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 KIAA0825Q8IV33 1275 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 PLPP6Q8IY26 295 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 FAM184AQ8NB25 1140 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 BANK1Q8NDB2 785 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 MYL10Q9BUA6 226 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 DNAJC18Q9H819 358 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 PGAP2Q9UHJ9 254 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 CNPY2Q9Y2B0 182 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 PCDHAC2Q9Y5I4 1007 aa8.55□□□□□ -1.04
ATF3-203ENST00000366981 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 TSPY2A6NKD2 308 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 CPLX1O14810 134 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 NMT2O60551 498 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 PRPF40AO75400 957 aaKnown RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 DEXIO95424 95 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 MBD3O95983 291 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 RXRAP19793 462 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 U2AF2P26368 475 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATF3-203ENST00000366981 SMARCA1P28370 1054 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 KRT85P78386 507 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 KIF23Q02241 960 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 CXCL9Q07325 125 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 GRM4Q14833 912 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 PKN1Q16512 942 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 C9orf131Q5VYM1 1079 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 SYNE3Q6ZMZ3 975 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 CATIPQ7Z7H3 387 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 RAB11FIP4Q86YS3 637 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 FAM177A1Q8N128 213 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 C8orf76Q96K31 380 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 PRMT6Q96LA8 375 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 ZNF277Q9NRM2 450 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 TOMM22Q9NS69 142 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 SERPINB13Q9UIV8 391 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
ATF3-203ENST00000366981 MORC2Q9Y6X9 1032 aaPredicted RBP8.54□□□□□ -1.04
ATF3-203ENST00000366981 FSD2A1L4K1 749 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms