RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GRAPLQ8TC17 118 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-201ENST00000361909 MAP3K14Q99558 947 aa21.57■■□□□ 1.04
CMTM3-201ENST00000361909 FECHP22830 423 aa21.56■■□□□ 1.04
CMTM3-201ENST00000361909 ERCC5P28715 1186 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-201ENST00000361909 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.56■■□□□ 1.04
CMTM3-201ENST00000361909 DEF6Q9H4E7 631 aa21.56■■□□□ 1.04
CMTM3-201ENST00000361909 ZMYM6O95789 1325 aa21.56■■□□□ 1.04
CMTM3-201ENST00000361909 KLRG2A4D1S0 409 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-201ENST00000361909 CHGBP05060 677 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 KANK3Q6NY19 840 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 CPLX2Q6PUV4 134 aaKnown RBP21.55■■□□□ 1.04
CMTM3-201ENST00000361909 DESI2Q9BSY9 194 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 NRXN2Q9P2S2 1712 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 ATP2B1P20020 1258 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 MDM2Q00987 491 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-201ENST00000361909 MAP9Q49MG5 647 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 PACS2Q86VP3 889 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 NCOA7Q8NI08 942 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 NCAPGQ9BPX3 1015 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 MAN1B1Q9UKM7 699 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 MYH7P12883 1935 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
CMTM3-201ENST00000361909 SNAP23O00161 211 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 KIF4BQ2VIQ3 1234 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 LRRC31Q6UY01 552 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 PPFIBP1Q86W92 1011 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 SPATA5Q8NB90 893 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 CCDC102AQ96A19 550 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 MYCBPQ99417 103 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-201ENST00000361909 NAPGQ99747 312 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-201ENST00000361909 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
CMTM3-201ENST00000361909 PUF60Q9UHX1 559 aaKnown RBP21.54■■□□□ 1.04
CMTM3-201ENST00000361909 ZNF804BA4D1E1 1349 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 PDE4BQ07343 736 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 MORC3Q14149 939 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 POSTNQ15063 836 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 LONRF3Q496Y0 759 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 CHST3Q7LGC8 479 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 RPGRQ92834 1020 aaKnown RBP21.54■■□□□ 1.04
CMTM3-201ENST00000361909 CTAGE1Q96RT6 745 aa21.54■■□□□ 1.04
CMTM3-201ENST00000361909 A0A087WUV0 522 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 SEMA3EO15041 775 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 BMP6P22004 513 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 SARSP49591 514 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 DNAJC21Q5F1R6 531 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 PI16Q6UXB8 463 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 RALYLQ86SE5 291 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 CNGA4Q8IV77 575 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 KRI1Q8N9T8 703 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 ALG1Q9BT22 464 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 GNL3LQ9NVN8 582 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 HOXA10P31260 410 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 BCAMP50895 628 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 PLCD1P51178 756 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 CAVIN4Q5BKX8 364 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 SWT1Q5T5J6 900 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 ITIH6Q6UXX5 1313 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 AFAP1L1Q8TED9 768 aa21.53■■□□□ 1.04
CMTM3-201ENST00000361909 RBM17Q96I25 401 aaKnown RBP21.53■■□□□ 1.04
CMTM3-201ENST00000361909 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
CMTM3-201ENST00000361909 PPFIA3O75145 1194 aa21.52■■□□□ 1.04
CMTM3-201ENST00000361909 VSNL1P62760 191 aa21.52■■□□□ 1.04
CMTM3-201ENST00000361909 RASGRF1Q13972 1273 aa21.52■■□□□ 1.04
CMTM3-201ENST00000361909 EZH2Q15910 746 aaKnown RBP21.52■■□□□ 1.04
CMTM3-201ENST00000361909 FOXP4Q8IVH2 680 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-201ENST00000361909 FAM204AQ9H8W3 233 aa21.52■■□□□ 1.04
CMTM3-201ENST00000361909 SOWAHDA6NJG2 315 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 CDC27P30260 824 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-201ENST00000361909 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 ZNF569Q5MCW4 686 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 KRT40Q6A162 431 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 APPBP2Q92624 585 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 ZSWIM4Q9H7M6 989 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 LZTFL1Q9NQ48 299 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 MFAP3LO75121 409 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 TRIM29Q14134 588 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 RAD9BQ6WBX8 426 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 MMS22LQ6ZRQ5 1243 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 TADA2BQ86TJ2 420 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 CRAMP1Q96RY5 1269 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 BRIP1Q9BX63 1249 aa21.51■■□□□ 1.03
CMTM3-201ENST00000361909 N4BP1O75113 896 aaKnown RBP21.5■■□□□ 1.03
CMTM3-201ENST00000361909 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
CMTM3-201ENST00000361909 UBE3CQ15386 1083 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 STK36Q9NRP7 1315 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 M0R2C6 588 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 BBOX1O75936 387 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 ADD2P35612 726 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 PBX1P40424 430 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 FMR1Q06787 632 aaKnown RBP eCLIP21.5■■□□□ 1.03
CMTM3-201ENST00000361909 TMTC1Q8IUR5 882 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 ZNF579Q8NAF0 562 aaKnown RBP21.5■■□□□ 1.03
CMTM3-201ENST00000361909 CCDC148Q8NFR7 591 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 LEMD3Q9Y2U8 911 aa21.5■■□□□ 1.03
CMTM3-201ENST00000361909 A0A0G2JLW4 131 aa21.49■■□□□ 1.03
CMTM3-201ENST00000361909 MTF1Q14872 753 aa21.49■■□□□ 1.03
CMTM3-201ENST00000361909 FILIP1LQ4L180 1135 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms