RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 NOX5Q96PH1 765 aa12.75□□□□□ -0.37
COL4A5-202ENST00000361603 PSTPIP2Q9H939 334 aa12.75□□□□□ -0.37
COL4A5-202ENST00000361603 CMA1P23946 247 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 CTNND2Q9UQB3 1225 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 MYL1P05976 194 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
COL4A5-202ENST00000361603 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 AK8Q96MA6 479 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 CSRNP2Q9H175 543 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 MTUS1Q9ULD2 1270 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 REREQ9P2R6 1566 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
COL4A5-202ENST00000361603 VPS72Q15906 364 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 GIMAP7Q8NHV1 300 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 TTLL1O95922 423 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-202ENST00000361603 TNNC1P63316 161 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 FOXP4Q8IVH2 680 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-202ENST00000361603 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-202ENST00000361603 TBC1D8BQ0IIM8 1120 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 AFF2P51816 1311 aa12.74□□□□□ -0.37
COL4A5-202ENST00000361603 CCNA1P78396 465 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 POLR2DO15514 142 aaKnown RBP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 HSF2BPO75031 334 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 LIFRP42702 1097 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 TCP10Q12799 353 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 TTC14Q96N46 770 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PLA2G12BQ9BX93 195 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 GAS7O60861 476 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-202ENST00000361603 CLCN1P35523 988 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PHKBQ93100 1093 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
COL4A5-202ENST00000361603 PPP6R2O75170 966 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 CFBP00751 764 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 M0QZ92 97 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 OPA1O60313 960 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-202ENST00000361603 ADORA1P30542 326 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 STX17P56962 302 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 VPS54Q9P1Q0 977 aa12.72□□□□□ -0.37
COL4A5-202ENST00000361603 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 BCRP11274 1271 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL4A5-202ENST00000361603 P4HA1P13674 534 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 TRPC3Q13507 836 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 KIF22Q14807 665 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
COL4A5-202ENST00000361603 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
COL4A5-202ENST00000361603 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
COL4A5-202ENST00000361603 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms