RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MORC4Q8TE76 937 aa7.47□□□□□ -1.21
CDC42SE2-201ENST00000360515 MAML3Q96JK9 1138 aa7.47□□□□□ -1.21
CDC42SE2-201ENST00000360515 USP44Q9H0E7 712 aa7.47□□□□□ -1.21
CDC42SE2-201ENST00000360515 MKRN4PQ13434 485 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 FAM43BQ6ZT52 329 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 KATNBL1Q9H079 304 aa7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 BTBD7Q9P203 1132 aa7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 CHD9Q3L8U1 2897 aa7.46□□□□□ -1.21
CDC42SE2-201ENST00000360515 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 IRX3P78415 501 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 PRKRIP1Q9H875 184 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 CABYRO75952 493 aa7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 MECOMQ03112 1051 aa7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 TLE2Q04725 743 aa7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDC42SE2-201ENST00000360515 GUCY1A2P33402 732 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 MTMR2Q13614 643 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 VPS37DQ86XT2 251 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 NHLH1Q02575 133 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 HDAC5Q9UQL6 1122 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 LAS1LQ9Y4W2 734 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 A0A1B0GUL7 405 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 COBLO75128 1261 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 DUSP11O75319 330 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 ALDH1L2Q3SY69 923 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 RNF180Q86T96 592 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 RAPGEFL1Q9UHV5 662 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 JAG2Q9Y219 1238 aa7.45□□□□□ -1.22
CDC42SE2-201ENST00000360515 FLT1P17948 1338 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 ST18O60284 1047 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 ATP2B3Q16720 1220 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 HOXC10Q9NYD6 342 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MYH4Q9Y623 1939 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 DSG3P32926 999 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 TCP10Q12799 353 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MVPQ14764 893 aaKnown RBP7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MSRAQ9UJ68 235 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 YBX2Q9Y2T7 364 aaKnown RBP7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 A0A0U1RQG5 324 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 ARVCFO00192 962 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 LPXNO60711 386 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 BAIAP3O94812 1187 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 AKR1A1P14550 325 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MRE11P49959 708 aa7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 MOV10L1Q9BXT6 1211 aaKnown RBP7.44□□□□□ -1.22
CDC42SE2-201ENST00000360515 KIAA1671Q9BY89 1806 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 SYNRGQ9UMZ2 1314 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 VCAM1P19320 739 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 ACLYP53396 1101 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 CHAF1AQ13111 956 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 AGBL1Q96MI9 1066 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 SLC9A7Q96T83 725 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 SPATC1LQ9H0A9 340 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 MTIF3Q9H2K0 278 aaKnown RBP7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 AKAP2Q9Y2D5 859 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 MICAL3Q7RTP6 2002 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 ADORA2AP29274 412 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 ADCYAP1R1P41586 468 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 PHKA1P46020 1223 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 TRMT2AQ8IZ69 625 aaKnown RBP7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 NEK9Q8TD19 979 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 ATP11BQ9Y2G3 1177 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 SMCHD1A6NHR9 2005 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 SLC44A5Q8NCS7 719 aa7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 C9orf78Q9NZ63 289 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-201ENST00000360515 DENND4AQ7Z401 1863 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 ZNF318Q5VUA4 2279 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 SMIM22K7EJ46 135 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 ALADP13716 330 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 ERMP1Q7Z2K6 904 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 PCSK9Q8NBP7 692 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 SP7Q8TDD2 431 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 TSR2Q969E8 191 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 SCN5AQ14524 2016 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 LOXHD1Q8IVV2 1947 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 RBM47A0AV96 593 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 UQCRFS1P1P0C7P4 283 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 OAZ1P54368 228 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 COG2Q14746 738 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 GJC2Q5T442 439 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 SESTD1Q86VW0 696 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms