RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
FAM3D-201ENST00000358781 PLIN4Q96Q06 1357 aa20.24■□□□□ 0.83
FAM3D-201ENST00000358781 POTEEQ6S8J3 1075 aa20.24■□□□□ 0.83
FAM3D-201ENST00000358781 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
FAM3D-201ENST00000358781 NYAP2Q9P242 653 aa20.24■□□□□ 0.83
FAM3D-201ENST00000358781 RBPJLQ9UBG7 517 aa20.24■□□□□ 0.83
FAM3D-201ENST00000358781 MYPNQ86TC9 1320 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 TNPO2O14787 897 aaKnown RBP20.23■□□□□ 0.83
FAM3D-201ENST00000358781 SPICE1Q8N0Z3 855 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
FAM3D-201ENST00000358781 MYH4Q9Y623 1939 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 PEX10O60683 326 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 TSPY3P0CV98 308 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 TSPY8P0CW00 308 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 TFAP4Q01664 338 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 PRKCZQ05513 592 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 LBX2Q6XYB7 198 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 ARMC5Q96C12 935 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 CEP95Q96GE4 821 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 INCENPQ9NQS7 918 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 MTMR4Q9NYA4 1195 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 RABGAP1Q9Y3P9 1069 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 RLFQ13129 1914 aa20.22■□□□□ 0.83
FAM3D-201ENST00000358781 SPDYE16A6NNV3 312 aaPredicted RBP20.21■□□□□ 0.83
FAM3D-201ENST00000358781 WDR46O15213 610 aaKnown RBP20.21■□□□□ 0.83
FAM3D-201ENST00000358781 ORC4O43929 436 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 NEFLP07196 543 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 FGRP09769 529 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 ERVK-24P63145 666 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 COG2Q14746 738 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 SLC9C1Q4G0N8 1177 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 RAET1EQ8TD07 263 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 COA7Q96BR5 231 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 GABRQQ9UN88 632 aa20.21■□□□□ 0.83
FAM3D-201ENST00000358781 CNMDO75829 334 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 CHMLP26374 656 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 Q3C1V9 767 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 DSCC1Q9BVC3 393 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 HOXC10Q9NYD6 342 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 BRCA2P51587 3418 aa20.2■□□□□ 0.82
FAM3D-201ENST00000358781 TSPY2A6NKD2 308 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 TTLL1O95922 423 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 FLT3LGP49771 235 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 HAND2P61296 217 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 NBPF11Q86T75 865 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 MKL1Q969V6 931 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 IL25Q9H293 177 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 SYNPO2Q9UMS6 1093 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 LAMA4Q16363 1823 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 PARP14Q460N5 1801 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 RAD50Q92878 1312 aa20.19■□□□□ 0.82
FAM3D-201ENST00000358781 RAD21O60216 631 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
FAM3D-201ENST00000358781 FLOT1O75955 427 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 SOX10P56693 466 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 BTBD7Q9P203 1132 aa20.18■□□□□ 0.82
FAM3D-201ENST00000358781 KIAA0100Q14667 2235 aaKnown RBP20.18■□□□□ 0.82
FAM3D-201ENST00000358781 A0A0G2JMZ2 1700 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 F5H6K3 240 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
FAM3D-201ENST00000358781 MAPK4P31152 587 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 DSG3P32926 999 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 KLRC3Q07444 240 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 IRF5Q13568 498 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 PPP4R3BQ5MIZ7 849 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 STAG1Q8WVM7 1258 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 PORCNQ9H237 461 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
FAM3D-201ENST00000358781 ZNF213O14771 459 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 NDUFB10O96000 172 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
FAM3D-201ENST00000358781 GRK4P32298 578 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 CCNA1P78396 465 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 RRP12Q5JTH9 1297 aaKnown RBP20.16■□□□□ 0.82
FAM3D-201ENST00000358781 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
FAM3D-201ENST00000358781 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
FAM3D-201ENST00000358781 MB21D1Q8N884 522 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 GJD2Q9UKL4 321 aa20.16■□□□□ 0.82
FAM3D-201ENST00000358781 PLXNB2O15031 1838 aa20.15■□□□□ 0.82
FAM3D-201ENST00000358781 NMT2O60551 498 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms