RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 USP21Q9UK80 565 aa16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
SLC6A20-202ENST00000358525 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 ASIC2Q16515 512 aa16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 SYNCQ9H7C4 482 aa16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 PPP2R2CQ9Y2T4 447 aa16.33■□□□□ 0.21
SLC6A20-202ENST00000358525 TMEM87AQ8NBN3 555 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 INO80Q9ULG1 1556 aaPredicted RBP16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 PSMB7Q99436 277 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 CRB1P82279 1406 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 IQSEC2Q5JU85 1478 aa16.33■□□□□ 0.2
SLC6A20-202ENST00000358525 EEF2P13639 858 aaKnown RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 CALUO43852 315 aaPredicted RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 PTPN21Q16825 1174 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 NBPF14Q5TI25 921 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 COBLO75128 1261 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 CDC25BP30305 580 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 BTDP43251 543 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 TTC14Q96N46 770 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 MAGEA1P43355 309 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ERCC6LQ2NKX8 1250 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ERFEQ4G0M1 354 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 SH2D4AQ9H788 454 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 ZSWIM5Q9P217 1185 aa16.32■□□□□ 0.2
SLC6A20-202ENST00000358525 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 ZEB2O60315 1214 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 FAM212AQ96EL1 285 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 NEXMIFQ5QGS0 1516 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 SMIM23A6NLE4 172 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 MCAMP43121 646 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 KCNQ4P56696 695 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 GTPBP6O43824 516 aaPredicted RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 NR5A1Q13285 461 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 CFAP58Q5T655 872 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 UTP14CQ5TAP6 766 aaKnown RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 SPATA1Q5VX52 437 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 MAEAQ7L5Y9 396 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 ATP10DQ9P241 1426 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 DDX39AO00148 427 aaKnown RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 HLFQ16534 295 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 GRAMD1CQ8IYS0 662 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 RNF26Q9BY78 433 aaPredicted RBP16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
SLC6A20-202ENST00000358525 BACH1O14867 736 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 FAM76AQ8TAV0 307 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 RPN1P04843 607 aaKnown RBP16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 RASGRF1Q13972 1273 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
SLC6A20-202ENST00000358525 MMP1P03956 469 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 TNFAIP3P21580 790 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 GSTA5Q7RTV2 222 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 A0A1W2PRG0 241 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 CFBP00751 764 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 ACTN2P35609 894 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 ETF1P62495 437 aaKnown RBP16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 OR8K1Q8NGG5 319 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 SELENOSQ9BQE4 189 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 C2CD5Q86YS7 1000 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
SLC6A20-202ENST00000358525 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms