RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 PFASO15067 1338 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 CYP2D7A0A087X1C5 515 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 IGHA2P01877 340 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 C12orf60Q5U649 245 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 WDR78Q5VTH9 848 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 C7orf61Q8IZ16 206 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 NPLOC4Q8TAT6 608 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 MOV10L1Q9BXT6 1211 aaKnown RBP12.34□□□□□ -0.43
LINC01560-201ENST00000357412 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
LINC01560-201ENST00000357412 HOXC10Q9NYD6 342 aa12.34□□□□□ -0.43
LINC01560-201ENST00000357412 MYH13Q9UKX3 1938 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 USP17L21D6R901 530 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.44
LINC01560-201ENST00000357412 BMP8BP34820 402 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 MFSD14CQ5VZR4 134 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC01560-201ENST00000357412 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 PUS7LQ9H0K6 701 aaKnown RBP12.33□□□□□ -0.44
LINC01560-201ENST00000357412 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
LINC01560-201ENST00000357412 PHIPQ8WWQ0 1821 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
LINC01560-201ENST00000357412 DSG3P32926 999 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 CYP2C19P33261 490 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 CDK8P49336 464 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 ICA1Q05084 483 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
LINC01560-201ENST00000357412 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 LPAR1Q92633 364 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
LINC01560-201ENST00000357412 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 SYN1P17600 705 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 ERCC3P19447 782 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 ADORA2AP29274 412 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 SHCBP1Q8NEM2 672 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
LINC01560-201ENST00000357412 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
LINC01560-201ENST00000357412 STRNO43815 780 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 COBLO75128 1261 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 FLOT1O75955 427 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 MAGEA10P43363 369 aaPredicted RBP12.3□□□□□ -0.44
LINC01560-201ENST00000357412 LRRC26Q2I0M4 334 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 STRBPQ96SI9 672 aaKnown RBP12.3□□□□□ -0.44
LINC01560-201ENST00000357412 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01560-201ENST00000357412 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 MAST2Q6P0Q8 1798 aa12.3□□□□□ -0.44
LINC01560-201ENST00000357412 WDR46O15213 610 aaKnown RBP12.29□□□□□ -0.44
LINC01560-201ENST00000357412 MSCO60682 206 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 CYBAP13498 195 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
LINC01560-201ENST00000357412 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 ZSCAN25Q6NSZ9 544 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 DPP9Q86TI2 863 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 AMOTL1Q8IY63 956 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 MROH8Q9H579 483 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
LINC01560-201ENST00000357412 GSG1L2A8MUP6 293 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 CNGA1P29973 690 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 TSHZ3Q63HK5 1081 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 OSBP2Q969R2 916 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 SENP6Q9GZR1 1112 aaPredicted RBP12.28□□□□□ -0.44
LINC01560-201ENST00000357412 FBXO28Q9NVF7 368 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 ARPP21Q9UBL0 812 aaPredicted RBP12.28□□□□□ -0.44
LINC01560-201ENST00000357412 PTPRFP10586 1907 aa12.28□□□□□ -0.44
LINC01560-201ENST00000357412 DNM1LO00429 736 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 PLS1Q14651 629 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 SBK1Q52WX2 424 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 APPBP2Q92624 585 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 PPP1R9AQ9ULJ8 1098 aa12.27□□□□□ -0.45
LINC01560-201ENST00000357412 VWA5AO00534 786 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
LINC01560-201ENST00000357412 SEPT4O43236 478 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 SLC25A27O95847 323 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 RASA1P20936 1047 aa12.26□□□□□ -0.45
LINC01560-201ENST00000357412 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
LINC01560-201ENST00000357412 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms