RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.36
TRAPPC11-202ENST00000357207 GOLGA8KD6RF30 607 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 LIG3P49916 1009 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 ATP11AP98196 1134 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 TSNARE1Q96NA8 513 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 ATP1A2P50993 1020 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 CEP85LQ5SZL2 805 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 APOA5Q6Q788 366 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
TRAPPC11-202ENST00000357207 MAP2K2P36507 400 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 TFAP4Q01664 338 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 KIF23Q02241 960 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 SYCE1Q8N0S2 351 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 SREK1Q8WXA9 508 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 FAM204AQ9H8W3 233 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 SARM1Q6SZW1 724 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 TAOK1Q7L7X3 1001 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 TNKSO95271 1327 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 CALCRLQ16602 461 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 ZNF365Q70YC5 407 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 PARD6BQ9BYG5 372 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 BUB1BO60566 1050 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 PTGDRQ13258 359 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 ARID5BQ14865 1188 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 TERF2Q15554 542 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 CCDC63Q8NA47 563 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
TRAPPC11-202ENST00000357207 USP17L12C9JPN9 530 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 USP17L21D6R901 530 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 CTNNA1P35221 906 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 POLA2Q14181 598 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 PTPN21Q16825 1174 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 KIF2CQ99661 725 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 RRP15Q9Y3B9 282 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 HGSO14964 777 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 PCK1P35558 622 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
TRAPPC11-202ENST00000357207 SPATA24Q86W54 205 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 ASIC3Q9UHC3 531 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 CCT5P48643 541 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 ENOX1Q8TC92 643 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 CCDC160A6NGH7 325 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 RPN1P04843 607 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 ADCY7P51828 1080 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 SF3A3Q12874 501 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 UBE3CQ15386 1083 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.367e-6■■□□□ 12.8
TRAPPC11-202ENST00000357207 MAST3O60307 1309 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 CACNA2D3Q8IZS8 1091 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 STMN2Q93045 179 aa17.29■□□□□ 0.36
TRAPPC11-202ENST00000357207 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 RAB17Q9H0T7 212 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 FOXP1Q9H334 677 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 ENC1O14682 589 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 ANKRD13CQ8N6S4 541 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 KIFAP3Q92845 792 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 KCNK3O14649 394 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 RBL2Q08999 1139 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 CEP128Q6ZU80 1094 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 PLCB1Q9NQ66 1216 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
TRAPPC11-202ENST00000357207 SASH1O94885 1247 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 FERP16591 822 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 LMNTD2Q8IXW0 634 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 EEF2KMTQ96G04 330 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms