RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ZNF397Q8NF99 534 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-201ENST00000355059 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-201ENST00000355059 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ABCC6O95255 1503 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 PSMD14O00487 310 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 PLS1Q14651 629 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 TNIP1Q15025 636 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-201ENST00000355059 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 OGFRQ9NZT2 677 aa12.66□□□□□ -0.38
NEIL1-201ENST00000355059 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 ZNF654Q8IZM8 581 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 WASF1Q92558 559 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 DAGLAQ9Y4D2 1042 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 BAZ2BQ9UIF8 2168 aaKnown RBP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 FAM208AQ9UK61 1670 aaKnown RBP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 IPO7O95373 1038 aaKnown RBP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 SLURP2P0DP57 97 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 CASQ1P31415 396 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 ZNF76P36508 570 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 FANCCQ00597 558 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 DPCR1Q3MIW9 517 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 BANK1Q8NDB2 785 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEIL1-201ENST00000355059 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 TCHHQ07283 1943 aa12.65□□□□□ -0.38
NEIL1-201ENST00000355059 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 AFMP43652 599 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 ST3GAL1Q11201 340 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.39
NEIL1-201ENST00000355059 ADALQ6DHV7 355 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 STYK1Q6J9G0 422 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.39
NEIL1-201ENST00000355059 NEDD4P46934 1319 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 IRF6O14896 467 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
NEIL1-201ENST00000355059 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
NEIL1-201ENST00000355059 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEIL1-201ENST00000355059 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 MRFAP1L1Q96HT8 127 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 NAPAP54920 295 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 PNMA1Q8ND90 353 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 SLC1A4P43007 532 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
NEIL1-201ENST00000355059 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
NEIL1-201ENST00000355059 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 PFKFB1P16118 471 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 STX17P56962 302 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 MYL5Q02045 173 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 BMS1Q14692 1282 aaKnown RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 EPB41L4AQ9HCS5 686 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 VPS54Q9P1Q0 977 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 USH1GQ495M9 461 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 HOMER2Q9NSB8 354 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 KRT40Q6A162 431 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-201ENST00000355059 FUCA2Q9BTY2 467 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
NEIL1-201ENST00000355059 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEIL1-201ENST00000355059 SLC16A2P36021 539 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 NFIAQ12857 509 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 PNOCQ13519 176 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
NEIL1-201ENST00000355059 CTR9Q6PD62 1173 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms