RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 DNAI1Q9UI46 699 aa20.68■□□□□ 0.9
APP-203ENST00000354192 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
APP-203ENST00000354192 PHF20Q9BVI0 1012 aa20.67■□□□□ 0.9
APP-203ENST00000354192 IL17RBQ9NRM6 502 aa20.67■□□□□ 0.9
APP-203ENST00000354192 RBM28Q9NW13 759 aaKnown RBP20.67■□□□□ 0.9
APP-203ENST00000354192 GGA1Q9UJY5 639 aa20.67■□□□□ 0.9
APP-203ENST00000354192 KIF5BP33176 963 aa20.67■□□□□ 0.9
APP-203ENST00000354192 TERF1P54274 439 aa20.67■□□□□ 0.9
APP-203ENST00000354192 WDR66Q8TBY9 1149 aa20.67■□□□□ 0.9
APP-203ENST00000354192 GJD4Q96KN9 370 aaPredicted RBP20.67■□□□□ 0.9
APP-203ENST00000354192 TUBE1Q9UJT0 475 aa20.67■□□□□ 0.9
APP-203ENST00000354192 AFF2P51816 1311 aa20.67■□□□□ 0.9
APP-203ENST00000354192 CDC25BP30305 580 aa20.67■□□□□ 0.9
APP-203ENST00000354192 IGSF3O75054 1194 aa20.66■□□□□ 0.9
APP-203ENST00000354192 CALM1P0DP23 149 aa20.66■□□□□ 0.9
APP-203ENST00000354192 CALM2P0DP24 149 aa20.66■□□□□ 0.9
APP-203ENST00000354192 CALM3P0DP25 149 aa20.66■□□□□ 0.9
APP-203ENST00000354192 LETM2Q2VYF4 491 aa20.66■□□□□ 0.9
APP-203ENST00000354192 RRAGBQ5VZM2 374 aa20.66■□□□□ 0.9
APP-203ENST00000354192 CCDC34Q96HJ3 373 aa20.66■□□□□ 0.9
APP-203ENST00000354192 TIGD1Q96MW7 591 aa20.66■□□□□ 0.9
APP-203ENST00000354192 CNTNAP5Q8WYK1 1306 aa20.66■□□□□ 0.9
APP-203ENST00000354192 ST5P78524 1137 aa20.66■□□□□ 0.9
APP-203ENST00000354192 LRRC47Q8N1G4 583 aaKnown RBP20.66■□□□□ 0.9
APP-203ENST00000354192 CD209Q9NNX6 404 aa20.66■□□□□ 0.9
APP-203ENST00000354192 ANAPC4Q9UJX5 808 aa20.66■□□□□ 0.9
APP-203ENST00000354192 ZNF215Q9UL58 517 aaPredicted RBP20.66■□□□□ 0.9
APP-203ENST00000354192 CTNND2Q9UQB3 1225 aa20.66■□□□□ 0.9
APP-203ENST00000354192 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
APP-203ENST00000354192 TYW1BQ6NUM6 668 aa20.65■□□□□ 0.9
APP-203ENST00000354192 XDHP47989 1333 aa20.65■□□□□ 0.9
APP-203ENST00000354192 FUT2Q10981 343 aa20.65■□□□□ 0.9
APP-203ENST00000354192 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
APP-203ENST00000354192 E4F1Q66K89 784 aaPredicted RBP20.65■□□□□ 0.9
APP-203ENST00000354192 RCSD1Q6JBY9 416 aa20.65■□□□□ 0.9
APP-203ENST00000354192 EYA3Q99504 573 aa20.65■□□□□ 0.9
APP-203ENST00000354192 HSD3B7Q9H2F3 369 aa20.65■□□□□ 0.9
APP-203ENST00000354192 CACNB3P54284 484 aa20.65■□□□□ 0.9
APP-203ENST00000354192 NAPAP54920 295 aa20.65■□□□□ 0.9
APP-203ENST00000354192 KIF18AQ8NI77 898 aa20.65■□□□□ 0.9
APP-203ENST00000354192 FAM205AQ6ZU69 1335 aa20.64■□□□□ 0.9
APP-203ENST00000354192 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
APP-203ENST00000354192 TEX33O43247 280 aa20.64■□□□□ 0.89
APP-203ENST00000354192 C12orf60Q5U649 245 aa20.64■□□□□ 0.89
APP-203ENST00000354192 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.89
APP-203ENST00000354192 PHLPP1O60346 1717 aa20.64■□□□□ 0.89
APP-203ENST00000354192 CBFA2T2O43439 604 aa20.64■□□□□ 0.89
APP-203ENST00000354192 NEMFO60524 1076 aa20.64■□□□□ 0.89
APP-203ENST00000354192 PAGE5Q96GU1 130 aa20.64■□□□□ 0.89
APP-203ENST00000354192 VPS16Q9H269 839 aa20.64■□□□□ 0.89
APP-203ENST00000354192 MYH13Q9UKX3 1938 aa20.63■□□□□ 0.89
APP-203ENST00000354192 KLRF2D3W0D1 207 aa20.63■□□□□ 0.89
APP-203ENST00000354192 ACTN4O43707 911 aaKnown RBP20.63■□□□□ 0.89
APP-203ENST00000354192 TCP10Q12799 353 aa20.63■□□□□ 0.89
APP-203ENST00000354192 ZNF622Q969S3 477 aaKnown RBP eCLIP20.63■□□□□ 0.89
APP-203ENST00000354192 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
APP-203ENST00000354192 ZSWIM4Q9H7M6 989 aa20.63■□□□□ 0.89
APP-203ENST00000354192 URI1O94763 535 aaPredicted RBP20.63■□□□□ 0.89
APP-203ENST00000354192 CD44P16070 742 aaKnown RBP20.63■□□□□ 0.89
APP-203ENST00000354192 BLIDQ8IZY5 108 aa20.63■□□□□ 0.89
APP-203ENST00000354192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
APP-203ENST00000354192 BCL9LQ86UU0 1499 aa20.63■□□□□ 0.89
APP-203ENST00000354192 TULP1O00294 542 aaPredicted RBP20.62■□□□□ 0.89
APP-203ENST00000354192 DDAH1O94760 285 aa20.62■□□□□ 0.89
APP-203ENST00000354192 CUL4BQ13620 913 aa20.62■□□□□ 0.89
APP-203ENST00000354192 CCDC150Q8NCX0 1101 aa20.62■□□□□ 0.89
APP-203ENST00000354192 PPP1R13BQ96KQ4 1090 aa20.62■□□□□ 0.89
APP-203ENST00000354192 SEMA3EO15041 775 aa20.62■□□□□ 0.89
APP-203ENST00000354192 QTRT2Q9H974 415 aaKnown RBP20.62■□□□□ 0.89
APP-203ENST00000354192 BIN2Q9UBW5 565 aaPredicted RBP20.62■□□□□ 0.89
APP-203ENST00000354192 POLLQ9UGP5 575 aa20.62■□□□□ 0.89
APP-203ENST00000354192 STAT6P42226 847 aa20.62■□□□□ 0.89
APP-203ENST00000354192 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
APP-203ENST00000354192 ZSCAN29Q8IWY8 852 aaPredicted RBP20.62■□□□□ 0.89
APP-203ENST00000354192 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
APP-203ENST00000354192 IKBKBO14920 756 aa20.61■□□□□ 0.89
APP-203ENST00000354192 UBA7P41226 1012 aa20.61■□□□□ 0.89
APP-203ENST00000354192 LDHCP07864 332 aa20.61■□□□□ 0.89
APP-203ENST00000354192 GDAQ9Y2T3 454 aa20.61■□□□□ 0.89
APP-203ENST00000354192 GYS1P13807 737 aa20.6■□□□□ 0.89
APP-203ENST00000354192 CDK8P49336 464 aa20.6■□□□□ 0.89
APP-203ENST00000354192 LZTFL1Q9NQ48 299 aa20.6■□□□□ 0.89
APP-203ENST00000354192 MDM2Q00987 491 aaPredicted RBP20.6■□□□□ 0.89
APP-203ENST00000354192 MTF1Q14872 753 aa20.6■□□□□ 0.89
APP-203ENST00000354192 ELF2Q15723 593 aa20.6■□□□□ 0.89
APP-203ENST00000354192 PFKFB3Q16875 520 aaPredicted RBP20.6■□□□□ 0.89
APP-203ENST00000354192 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
APP-203ENST00000354192 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
APP-203ENST00000354192 DACH1Q9UI36 760 aa20.6■□□□□ 0.89
APP-203ENST00000354192 CCNT1O60563 726 aaKnown RBP20.6■□□□□ 0.89
APP-203ENST00000354192 HSPA1LP34931 641 aa20.6■□□□□ 0.89
APP-203ENST00000354192 TMEM60Q9H2L4 133 aa20.6■□□□□ 0.89
APP-203ENST00000354192 INTS13Q9NVM9 706 aa20.6■□□□□ 0.89
APP-203ENST00000354192 ORC4O43929 436 aa20.59■□□□□ 0.89
APP-203ENST00000354192 TXLNAP40222 546 aa20.59■□□□□ 0.89
APP-203ENST00000354192 IQUBQ8NA54 791 aa20.59■□□□□ 0.89
APP-203ENST00000354192 MLKLQ8NB16 471 aa20.59■□□□□ 0.89
APP-203ENST00000354192 COA7Q96BR5 231 aa20.59■□□□□ 0.89
APP-203ENST00000354192 CEP95Q96GE4 821 aa20.59■□□□□ 0.89
APP-203ENST00000354192 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms