RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GMIPQ9P107 970 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 SLC6A14Q9UN76 642 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ASXL2Q76L83 1435 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF891A8MT65 544 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 GABRDO14764 452 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ADAM11O75078 769 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TCIRG1Q13488 830 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ABCB5Q2M3G0 1257 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 PSAPL1Q6NUJ1 521 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 BRAPQ7Z569 592 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 APBB1IPQ7Z5R6 666 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 CCDC84Q86UT8 332 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF513Q8N8E2 541 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ZSWIM2Q8NEG5 633 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 KIF2CQ99661 725 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TM9SF2Q99805 663 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TRIM39Q9HCM9 518 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 CRTAC1Q9NQ79 661 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 SUCOQ9UBS9 1254 aaKnown RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 PCDHGC5Q9Y5F6 944 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 PRR36Q9H6K5 1346 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 CDC14CA4D256 554 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 M0R2C6 588 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 NEMP1O14524 444 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 SHOXO15266 292 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 MYBP10242 640 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 LRRN4CLQ8ND94 238 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 OSBP2Q969R2 916 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 HOOK2Q96ED9 719 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 KLHDC7BQ96G42 594 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 NDOR1Q9UHB4 597 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF214Q9UL59 606 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 PLAAQ9Y263 795 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TNKSO95271 1327 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 SMNDC1O75940 238 aaKnown RBP eCLIP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 BIRC2Q13490 618 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 STAT4Q14765 748 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 RPS26P11Q5JNZ5 115 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 C10orf62Q5T681 223 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF227Q86WZ6 799 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 NXPE1Q8N323 547 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 C19orf47Q8N9M1 422 aaKnown RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 GALNT11Q8NCW6 608 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 BAHD1Q8TBE0 780 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-202ENST00000354071 IRF7Q92985 503 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 CDC6Q99741 560 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 HAUS7Q99871 368 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 MS4A5Q9H3V2 200 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 CNNM2Q9H8M5 875 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 KCNK4Q9NYG8 393 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TJP2Q9UDY2 1190 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 TRHDEQ9UKU6 1024 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 HIF3AQ9Y2N7 669 aa2.2□□□□□ -2.06
BRCA1-202ENST00000354071 PRODHO43272 600 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ALBP02768 609 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 PGRP06401 933 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 JMJD7P0C870 316 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ATF3P18847 181 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 IARSP41252 1262 aaKnown RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 SNW1Q13573 536 aaKnown RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 SLC4A10Q6U841 1118 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 MICALL1Q8N3F8 863 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 OR6P1Q8NGX9 317 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 CEP89Q96ST8 783 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 KRTAP4-8Q9BYQ9 185 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TYW1Q9NV66 732 aaKnown RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 GGA1Q9UJY5 639 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TNRC18O15417 2968 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 NEURL1BA8MQ27 555 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ADH7P40394 386 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 AFF1P51825 1210 aaKnown RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 SLC7A5Q01650 507 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 CYP4F3Q08477 520 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 PDE3AQ14432 1141 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 NTRK3Q16288 839 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 DENND5AQ6IQ26 1287 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ELMSAN1Q6PJG2 1045 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TTC8Q8TAM2 541 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 BTN2A2Q8WVV5 523 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 C8orf48Q96LL4 319 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 DHRS4Q9BTZ2 278 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 USP26Q9BXU7 913 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TRBV23-1A0A0A0MS06 115 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 LCHNA4D1U4 455 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 IMPDH2P12268 514 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 NEK2P51955 445 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ETF1P62495 437 aaKnown RBP2.19□□□□□ -2.06
BRCA1-202ENST00000354071 FIGNL1Q6PIW4 674 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 IL22RA1Q8N6P7 574 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 CNTD1Q8N815 330 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 WDR66Q8TBY9 1149 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 MORC4Q8TE76 937 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 RHOBTB2Q9BYZ6 727 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 ADAM19Q9H013 955 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 EFCC1Q9HA90 598 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 TCEAL9Q9UHQ7 104 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 PPP1R9AQ9ULJ8 1098 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 KRBA1A5PL33 1030 aa2.19□□□□□ -2.06
BRCA1-202ENST00000354071 PTPRAP18433 802 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms