RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 ICA1Q05084 483 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
SMAD9-201ENST00000350148 ORC4O43929 436 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 TRIM14Q14142 442 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 ABCB5Q2M3G0 1257 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 FSD2A1L4K1 749 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 PRKAB2O43741 272 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 TCP10Q12799 353 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 SLC39A14Q15043 492 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 TAF4BQ92750 862 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 KCNG1Q9UIX4 513 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 RPL13P26373 211 aaKnown RBP13.68□□□□□ -0.22
SMAD9-201ENST00000350148 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
SMAD9-201ENST00000350148 TOB2Q14106 344 aaPredicted RBP13.68□□□□□ -0.22
SMAD9-201ENST00000350148 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
SMAD9-201ENST00000350148 SALL3Q9BXA9 1300 aa13.68□□□□□ -0.22
SMAD9-201ENST00000350148 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 CALCRLQ16602 461 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 PRR5LQ6MZQ0 368 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 FAM13AO94988 1023 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 SCNN1DP51172 638 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 WDR78Q5VTH9 848 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 CASP7P55210 303 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 PAIP2Q9BPZ3 127 aaKnown RBP13.67□□□□□ -0.22
SMAD9-201ENST00000350148 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
SMAD9-201ENST00000350148 POSTNQ15063 836 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 SLFN13Q68D06 897 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 MCF2L2Q86YR7 1114 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 PAXBP1Q9Y5B6 917 aa13.67□□□□□ -0.22
SMAD9-201ENST00000350148 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
SMAD9-201ENST00000350148 KRT13P13646 458 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 PEAK1Q9H792 1746 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 JAKMIP3Q5VZ66 844 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 FBXO33Q7Z6M2 555 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 MCM3P25205 808 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 GPSM2P81274 684 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 KCNB2Q92953 911 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 ATP6V0A2Q9Y487 856 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 LTN1O94822 1766 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 ERLIN2O94905 339 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 MMP1P03956 469 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 CASQ1P31415 396 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 FAM193AP78312 1265 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
SMAD9-201ENST00000350148 ISM2Q6H9L7 571 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 AK8Q96MA6 479 aa13.66□□□□□ -0.22
SMAD9-201ENST00000350148 RESTQ13127 1097 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 PRIMPOLQ96LW4 560 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMAD9-201ENST00000350148 PARP4Q9UKK3 1724 aaKnown RBP13.65□□□□□ -0.22
SMAD9-201ENST00000350148 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 USP14P54578 494 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 INCENPQ9NQS7 918 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 CDK8P49336 464 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
SMAD9-201ENST00000350148 CABP7Q86V35 215 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
SMAD9-201ENST00000350148 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
SMAD9-201ENST00000350148 PFKFB1P16118 471 aa13.65□□□□□ -0.23
SMAD9-201ENST00000350148 CETN2P41208 172 aa13.65□□□□□ -0.23
SMAD9-201ENST00000350148 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.23
SMAD9-201ENST00000350148 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.23
SMAD9-201ENST00000350148 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.23
SMAD9-201ENST00000350148 KIAA1468Q9P260 1216 aa13.65□□□□□ -0.23
SMAD9-201ENST00000350148 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms