RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
PTPRU-201ENST00000345512 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
PTPRU-201ENST00000345512 ENC1O14682 589 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 PTPREP23469 700 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GOPCQ9HD26 462 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GOLGA6CA6NDK9 693 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GOLGA6DP0CG33 693 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 CASP1P29466 404 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GTF2A1P52655 376 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 KRT79Q5XKE5 535 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GOLGA6AQ9NYA3 693 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GNA11P29992 359 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 RNF26Q9BY78 433 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-201ENST00000345512 TSGA10Q9BZW7 698 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GYG1P46976 350 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 CCDC113Q9H0I3 377 aa17.41■□□□□ 0.38
PTPRU-201ENST00000345512 GOLGA6BA6NDN3 693 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 SND1Q7KZF4 910 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 LCORLQ8N3X6 602 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 NUP58Q9BVL2 599 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 HAUS4Q9H6D7 363 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 CC2D1AQ6P1N0 951 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 SNAP23O00161 211 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 TNNI2P48788 182 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 RBM5P52756 815 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
PTPRU-201ENST00000345512 WDR24Q96S15 920 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 NEDD4P46934 1319 aa17.4■□□□□ 0.38
PTPRU-201ENST00000345512 CDC25AP30304 524 aa17.39■□□□□ 0.38
PTPRU-201ENST00000345512 SV2BQ7L1I2 683 aa17.39■□□□□ 0.38
PTPRU-201ENST00000345512 METTL16Q86W50 562 aaKnown RBP17.39■□□□□ 0.38
PTPRU-201ENST00000345512 H7C1D1 291 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 CCNT1O60563 726 aaKnown RBP17.39■□□□□ 0.37
PTPRU-201ENST00000345512 RPN1P04843 607 aaKnown RBP17.39■□□□□ 0.37
PTPRU-201ENST00000345512 RNASE9P60153 205 aaKnown RBP17.39■□□□□ 0.37
PTPRU-201ENST00000345512 CFAP58Q5T655 872 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 NLRP10Q86W26 655 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-201ENST00000345512 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 PANX2Q96RD6 677 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 FAM207AQ9NSI2 230 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-201ENST00000345512 TXKP42681 527 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 C8orf74Q6P047 294 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 GOLGA5Q8TBA6 731 aa17.39■□□□□ 0.37
PTPRU-201ENST00000345512 MAGEA1P43355 309 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 FAN1Q9Y2M0 1017 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 TRAF5O00463 557 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 SCG2P13521 617 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-201ENST00000345512 TFAP4Q01664 338 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 TYW1BQ6NUM6 668 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 UBN2Q6ZU65 1347 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 TADA3O75528 432 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 GSTO1P78417 241 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 CNNM4Q6P4Q7 775 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 ZBTB1Q9Y2K1 713 aa17.38■□□□□ 0.37
PTPRU-201ENST00000345512 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 DDB1Q16531 1140 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 IFIH1Q9BYX4 1025 aaKnown RBP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 IRX2Q9BZI1 471 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 LY9Q9HBG7 655 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 IFT172Q9UG01 1749 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 GOLGA6L7A0A1B0GV03 622 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 TEX33O43247 280 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 DNM2P50570 870 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 C2CD5Q86YS7 1000 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 OTUD6BQ8N6M0 293 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 ATP2C2O75185 946 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 ZMYND10O75800 440 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 KCNJ6P48051 423 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 DYMQ7RTS9 669 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 CABP7Q86V35 215 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 OXER1Q8TDS5 423 aa17.37■□□□□ 0.37
PTPRU-201ENST00000345512 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
PTPRU-201ENST00000345512 ANTXR2P58335 489 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms