RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TESPA1A2RU30 521 aaPredicted RBP13.97□□□□□ -0.17
SNCA-202ENST00000345009 MCCP23508 829 aa13.97□□□□□ -0.17
SNCA-202ENST00000345009 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
SNCA-202ENST00000345009 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
SNCA-202ENST00000345009 RALYLQ86SE5 291 aaKnown RBP13.97□□□□□ -0.17
SNCA-202ENST00000345009 IQCA1Q86XH1 822 aa13.97□□□□□ -0.17
SNCA-202ENST00000345009 JMYQ8N9B5 988 aa13.97□□□□□ -0.17
SNCA-202ENST00000345009 ZCCHC17Q9NP64 241 aaKnown RBP13.97□□□□□ -0.17
SNCA-202ENST00000345009 TTLL1O95922 423 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 CYP21A2P08686 494 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 JAG1P78504 1218 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 MTMR2Q13614 643 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 KRT32Q14532 448 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 GADL1Q6ZQY3 521 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
SNCA-202ENST00000345009 NCOA7Q8NI08 942 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 KIAA1683Q9H0B3 1180 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 GOPCQ9HD26 462 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 NYAP2Q9P242 653 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 SIPA1L1O43166 1804 aa13.96□□□□□ -0.17
SNCA-202ENST00000345009 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 EEF2P13639 858 aaKnown RBP13.95□□□□□ -0.18
SNCA-202ENST00000345009 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 HMGCS2P54868 508 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 SART3Q15020 963 aaKnown RBP13.95□□□□□ -0.18
SNCA-202ENST00000345009 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 CREB3L3Q68CJ9 461 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
SNCA-202ENST00000345009 TBC1D10CQ8IV04 446 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 BRI3BPQ8WY22 251 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 LPAR1Q92633 364 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 TTC14Q96N46 770 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 TCP11L1Q9NUJ3 509 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 MTMR4Q9NYA4 1195 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.95□□□□□ -0.18
SNCA-202ENST00000345009 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
SNCA-202ENST00000345009 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 ERICH2A1L162 156 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 E7EWF7 191 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 SLC27A2O14975 620 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 KDM4AO75164 1064 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
SNCA-202ENST00000345009 MKL1Q969V6 931 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 NBPF3Q9H094 633 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 TMX2Q9Y320 296 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 PLIN4Q96Q06 1357 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 MYH8P13535 1937 aa13.94□□□□□ -0.18
SNCA-202ENST00000345009 B4E1Z4 1266 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 PDHXO00330 501 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 RAD21O60216 631 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 HMGB1P09429 215 aaKnown RBP13.93□□□□□ -0.18
SNCA-202ENST00000345009 OSBPP22059 807 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
SNCA-202ENST00000345009 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNCA-202ENST00000345009 ZFYVE28Q9HCC9 887 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
SNCA-202ENST00000345009 ZSWIM5Q9P217 1185 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 LAMB1P07942 1786 aa13.93□□□□□ -0.18
SNCA-202ENST00000345009 NEDD4P46934 1319 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 IGKV6D-41A0A0C4DH26 115 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 TRPA1O75762 1119 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 MCM5P33992 734 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 HSPA4P34932 840 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 IRX3P78415 501 aaPredicted RBP13.92□□□□□ -0.18
SNCA-202ENST00000345009 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
SNCA-202ENST00000345009 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
SNCA-202ENST00000345009 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 C12orf42Q96LP6 360 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 PTPN18Q99952 460 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 EMILIN3Q9NT22 766 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 BOLA1Q9Y3E2 137 aa13.92□□□□□ -0.18
SNCA-202ENST00000345009 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 IGF2BP3O00425 579 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms