RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 RASA1P20936 1047 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 PDE4BQ07343 736 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 LBX2Q6XYB7 198 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 ZNF444Q8N0Y2 327 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-201ENST00000344376 OSBPL3Q9H4L5 887 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 GOPCQ9HD26 462 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 SOCS4Q8WXH5 440 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 HOXC10Q9NYD6 342 aa19.15■□□□□ 0.66
ATG4B-201ENST00000344376 SPDYE16A6NNV3 312 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-201ENST00000344376 WDR46O15213 610 aaKnown RBP19.14■□□□□ 0.65
ATG4B-201ENST00000344376 PPARAQ07869 468 aa19.14■□□□□ 0.65
ATG4B-201ENST00000344376 COG2Q14746 738 aa19.14■□□□□ 0.65
ATG4B-201ENST00000344376 MCMDC2Q4G0Z9 681 aa19.14■□□□□ 0.65
ATG4B-201ENST00000344376 SIAH1Q8IUQ4 282 aa19.14■□□□□ 0.65
ATG4B-201ENST00000344376 SPICE1Q8N0Z3 855 aa19.14■□□□□ 0.65
ATG4B-201ENST00000344376 RBBP6Q7Z6E9 1792 aaKnown RBP19.14■□□□□ 0.65
ATG4B-201ENST00000344376 PEX10O60683 326 aa19.13■□□□□ 0.65
ATG4B-201ENST00000344376 ELNP15502 786 aa19.13■□□□□ 0.65
ATG4B-201ENST00000344376 EN2P19622 333 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-201ENST00000344376 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
ATG4B-201ENST00000344376 RAD21O60216 631 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 PRDM1O75626 825 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 FLOT1O75955 427 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 INHAP05111 366 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 CCL5P13501 91 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 MTFR1Q15390 333 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 Q3C1V9 767 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 FAM227BQ96M60 508 aa19.12■□□□□ 0.65
ATG4B-201ENST00000344376 A0A0D9SFI3 127 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 CNMDO75829 334 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 MFAP1P55081 439 aaKnown RBP19.11■□□□□ 0.65
ATG4B-201ENST00000344376 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-201ENST00000344376 WDR78Q5VTH9 848 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 GPR142Q7Z601 462 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 PLEKHH3Q7Z736 793 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 MB21D1Q8N884 522 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.11■□□□□ 0.65
ATG4B-201ENST00000344376 RNF208Q9H0X6 261 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 PORCNQ9H237 461 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 NYAP2Q9P242 653 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 GJD2Q9UKL4 321 aa19.11■□□□□ 0.65
ATG4B-201ENST00000344376 TSPY3P0CV98 308 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 TSPY8P0CW00 308 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 KIAA1755Q5JYT7 1200 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 POTEEQ6S8J3 1075 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 HIP1O00291 1037 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 HMGCRP04035 888 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 DSG3P32926 999 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 RGS2P41220 211 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 ALX1Q15699 326 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 PPP4R3BQ5MIZ7 849 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 VPS53Q5VIR6 699 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 TRMT44Q8IYL2 757 aaKnown RBP19.1■□□□□ 0.65
ATG4B-201ENST00000344376 DIAPH3Q9NSV4 1193 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 BTBD7Q9P203 1132 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 IVNS1ABPQ9Y6Y0 642 aa19.1■□□□□ 0.65
ATG4B-201ENST00000344376 CENPFP49454 3210 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 CCDC171Q6TFL3 1326 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 PLIN4Q96Q06 1357 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 FOXP2O15409 715 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 GJB1P08034 283 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 SDSP20132 328 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 CYP2B6P20813 491 aa19.09■□□□□ 0.65
ATG4B-201ENST00000344376 SAMD1Q6SPF0 538 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-201ENST00000344376 IGKV6D-41A0A0C4DH26 115 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 XRCC5P13010 732 aaKnown RBP19.08■□□□□ 0.65
ATG4B-201ENST00000344376 NEDD1Q8NHV4 660 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 CEP95Q96GE4 821 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 UNC93B1Q9H1C4 597 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 SYNPO2Q9UMS6 1093 aa19.08■□□□□ 0.65
ATG4B-201ENST00000344376 KIAA0100Q14667 2235 aaKnown RBP19.07■□□□□ 0.64
ATG4B-201ENST00000344376 TTLL1O95922 423 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-201ENST00000344376 TFAP4Q01664 338 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 CTDSPL2Q05D32 466 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 MORN1Q5T089 497 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 ATG4CQ96DT6 458 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 APBA2Q99767 749 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 SPATC1LQ9H0A9 340 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 MTMR4Q9NYA4 1195 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 GREB1LQ9C091 1923 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-201ENST00000344376 ZMYM6O95789 1325 aa19.07■□□□□ 0.64
ATG4B-201ENST00000344376 SLC15A5A6NIM6 579 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 TSPY2A6NKD2 308 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 HSPD1P10809 573 aaKnown RBP19.06■□□□□ 0.64
ATG4B-201ENST00000344376 GJA8P48165 433 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 PLS1Q14651 629 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 FAM83BQ5T0W9 1011 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 ZNF589Q86UQ0 364 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-201ENST00000344376 F5H6K3 240 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 NDUFB10O96000 172 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 FGAP02671 866 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 CAPN2P17655 700 aa19.06■□□□□ 0.64
ATG4B-201ENST00000344376 KLRC3Q07444 240 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms