RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 FZD1Q9UP38 647 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 CCDC196A0A1B0GTZ2 297 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 RASA1P20936 1047 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 SHMT1P34896 483 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 TNNI2P48788 182 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 TFAP4Q01664 338 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 TNFAIP1Q13829 316 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 NBPF12Q5TAG4 269 aaPredicted RBP21.98■■□□□ 1.11
EGFR-202ENST00000342916 CATIPQ7Z7H3 387 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 CRACR2BQ8N4Y2 399 aaPredicted RBP21.98■■□□□ 1.11
EGFR-202ENST00000342916 RGS22Q8NE09 1264 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 MKNK2Q9HBH9 465 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 IL17RBQ9NRM6 502 aa21.98■■□□□ 1.11
EGFR-202ENST00000342916 KIF28PB7ZC32 967 aa21.97■■□□□ 1.11
EGFR-202ENST00000342916 GUCY1A2P33402 732 aa21.97■■□□□ 1.11
EGFR-202ENST00000342916 APOBEC3FQ8IUX4 373 aaKnown RBP21.97■■□□□ 1.11
EGFR-202ENST00000342916 CCDC82Q8N4S0 544 aa21.97■■□□□ 1.11
EGFR-202ENST00000342916 ISY1Q9ULR0 285 aaKnown RBP21.96■■□□□ 1.11
EGFR-202ENST00000342916 KIF23Q02241 960 aaPredicted RBP21.96■■□□□ 1.11
EGFR-202ENST00000342916 RRP1BQ14684 758 aaKnown RBP21.96■■□□□ 1.11
EGFR-202ENST00000342916 KRT40Q6A162 431 aa21.96■■□□□ 1.11
EGFR-202ENST00000342916 USP28Q96RU2 1077 aa21.96■■□□□ 1.11
EGFR-202ENST00000342916 EHD4Q9H223 541 aa21.96■■□□□ 1.11
EGFR-202ENST00000342916 CFAP45Q9UL16 551 aa21.96■■□□□ 1.11
EGFR-202ENST00000342916 SYCE3A1L190 88 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 DDAH1O94760 285 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 NT5C2P49902 561 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 CEBPZQ03701 1054 aaKnown RBP21.95■■□□□ 1.1
EGFR-202ENST00000342916 DCPSQ96C86 337 aaKnown RBP21.95■■□□□ 1.1
EGFR-202ENST00000342916 VEGFAP15692 232 aaPredicted RBP21.95■■□□□ 1.1
EGFR-202ENST00000342916 FUT2Q10981 343 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 PPP2R5BQ15173 497 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 L1TD1Q5T7N2 865 aaKnown RBP21.95■■□□□ 1.1
EGFR-202ENST00000342916 TAOK2Q9UL54 1235 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 CLEC11AQ9Y240 323 aa21.95■■□□□ 1.1
EGFR-202ENST00000342916 SSC5DA1L4H1 1573 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 TRIM22Q8IYM9 498 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
EGFR-202ENST00000342916 PGBD1Q96JS3 809 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 GLIS2Q9BZE0 524 aaPredicted RBP21.94■■□□□ 1.1
EGFR-202ENST00000342916 XRCC6P12956 609 aaKnown RBP eCLIP21.94■■□□□ 1.1
EGFR-202ENST00000342916 AKR1B1P15121 316 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 JAG1P78504 1218 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 ATL3Q6DD88 541 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 KRT26Q7Z3Y9 468 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 CLEC10AQ8IUN9 316 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 PITPNM2Q9BZ72 1349 aa21.94■■□□□ 1.1
EGFR-202ENST00000342916 PLEKHA8P1O95397 391 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 CALM1P0DP23 149 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 CALM2P0DP24 149 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 CALM3P0DP25 149 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 MAP1SQ66K74 1059 aaPredicted RBP21.93■■□□□ 1.1
EGFR-202ENST00000342916 BRAPQ7Z569 592 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 METTL16Q86W50 562 aaKnown RBP21.93■■□□□ 1.1
EGFR-202ENST00000342916 FOXP4Q8IVH2 680 aaPredicted RBP21.93■■□□□ 1.1
EGFR-202ENST00000342916 ZNF444Q8N0Y2 327 aaPredicted RBP21.93■■□□□ 1.1
EGFR-202ENST00000342916 TRIM34Q9BYJ4 488 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
EGFR-202ENST00000342916 GRPEL1Q9HAV7 217 aa21.93■■□□□ 1.1
EGFR-202ENST00000342916 TSPY3P0CV98 308 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 TSPY8P0CW00 308 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 FMR1Q06787 632 aaKnown RBP eCLIP21.92■■□□□ 1.1
EGFR-202ENST00000342916 PNMA8AQ86V59 439 aaPredicted RBP21.92■■□□□ 1.1
EGFR-202ENST00000342916 SULF1Q8IWU6 871 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 ZNF396Q96N95 335 aaPredicted RBP21.92■■□□□ 1.1
EGFR-202ENST00000342916 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.92■■□□□ 1.1
EGFR-202ENST00000342916 RCOR1Q9UKL0 485 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 GDF11O95390 407 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 DGKHQ86XP1 1220 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 ANKS1AQ92625 1134 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 TCP11L1Q9NUJ3 509 aa21.92■■□□□ 1.1
EGFR-202ENST00000342916 RBM28Q9NW13 759 aaKnown RBP21.92■■□□□ 1.1
EGFR-202ENST00000342916 DEXIO95424 95 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 MRE11P49959 708 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 CCDC183Q5T5S1 534 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 MYSM1Q5VVJ2 828 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 WASF1Q92558 559 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.91■■□□□ 1.1
EGFR-202ENST00000342916 RNF26Q9BY78 433 aaPredicted RBP21.91■■□□□ 1.1
EGFR-202ENST00000342916 ZNF287Q9HBT7 754 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 SWAP70Q9UH65 585 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 LIG1P18858 919 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 PRKG1Q13976 671 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 TMTC3Q6ZXV5 915 aa21.91■■□□□ 1.1
EGFR-202ENST00000342916 ZC3H15Q8WU90 426 aaKnown RBP21.91■■□□□ 1.1
EGFR-202ENST00000342916 GREB1LQ9C091 1923 aaPredicted RBP21.9■■□□□ 1.1
EGFR-202ENST00000342916 ATAD5Q96QE3 1844 aa21.9■■□□□ 1.1
EGFR-202ENST00000342916 TRIM29Q14134 588 aa21.9■■□□□ 1.1
EGFR-202ENST00000342916 LRSAM1Q6UWE0 723 aa21.9■■□□□ 1.1
EGFR-202ENST00000342916 MPHOSPH10O00566 681 aaKnown RBP21.9■■□□□ 1.1
EGFR-202ENST00000342916 CERKLQ49MI3 558 aaPredicted RBP21.9■■□□□ 1.1
EGFR-202ENST00000342916 KAT14Q9H8E8 782 aa21.9■■□□□ 1.1
EGFR-202ENST00000342916 HERC5Q9UII4 1024 aaKnown RBP21.9■■□□□ 1.1
EGFR-202ENST00000342916 BAZ2BQ9UIF8 2168 aaKnown RBP21.89■■□□□ 1.1
EGFR-202ENST00000342916 TRAF5O00463 557 aa21.89■■□□□ 1.09
EGFR-202ENST00000342916 PKN1Q16512 942 aa21.89■■□□□ 1.09
EGFR-202ENST00000342916 CTCFLQ8NI51 663 aaPredicted RBP21.89■■□□□ 1.09
EGFR-202ENST00000342916 SHISA4Q96DD7 197 aa21.89■■□□□ 1.09
EGFR-202ENST00000342916 RTEL1Q9NZ71 1219 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms