RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 HOOK2Q96ED9 719 aa10.09□□□□□ -0.79
CCDC83-202ENST00000342404 IGKV6D-41A0A0C4DH26 115 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CCDC196A0A1B0GTZ2 297 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CTDNEP1O95476 244 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 ASNSP08243 561 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CALM1P0DP23 149 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CALM2P0DP24 149 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CALM3P0DP25 149 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 GUCY1A2P33402 732 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 PKP1Q13835 747 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
CCDC83-202ENST00000342404 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 SPICE1Q8N0Z3 855 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 NSUN7Q8NE18 718 aaKnown RBP10.08□□□□□ -0.8
CCDC83-202ENST00000342404 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
CCDC83-202ENST00000342404 SSC5DA1L4H1 1573 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 hCG_1642624A0A1W2PR95 340 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 TRAF5O00463 557 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 NF2P35240 595 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 ECE1P42892 770 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CDC37L1Q7L3B6 337 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 FEZ1Q99689 392 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 SLC26A6Q9BXS9 759 aa10.08□□□□□ -0.8
CCDC83-202ENST00000342404 FAM217BQ9NTX9 383 aaPredicted RBP10.08□□□□□ -0.8
CCDC83-202ENST00000342404 MYH6P13533 1939 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 UBE2Q2LH0YL09 131 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 PPP1R12BO60237 982 aaPredicted RBP10.07□□□□□ -0.8
CCDC83-202ENST00000342404 CDKL5O76039 1030 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 KIF5BP33176 963 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 FMR1Q06787 632 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCDC83-202ENST00000342404 CCDC96Q2M329 555 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 CPVLQ9H3G5 476 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 ARHGEF10LQ9HCE6 1279 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 CWC22Q9HCG8 908 aaKnown RBP10.07□□□□□ -0.8
CCDC83-202ENST00000342404 PICK1Q9NRD5 415 aa10.07□□□□□ -0.8
CCDC83-202ENST00000342404 VPS37CA5D8V6 355 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 CTNND1O60716 968 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 PARP1P09874 1014 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 PDHBP11177 359 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 RCAN1P53805 252 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 MOB2Q70IA6 237 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 KCTD1Q719H9 257 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 LLPHQ9BRT6 129 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 ORC3Q9UBD5 711 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 SLC1A4P43007 532 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 HMGN5P82970 282 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 IKQ13123 557 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 NTRK3Q16288 839 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 LARP1BQ659C4 914 aaKnown RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 SAMD1Q6SPF0 538 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 SIAH1Q8IUQ4 282 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 NUP88Q99567 741 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
CCDC83-202ENST00000342404 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 CHMP5Q9NZZ3 219 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 NYAP2Q9P242 653 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 DOCK1Q14185 1865 aa10.06□□□□□ -0.8
CCDC83-202ENST00000342404 TRIM75PA6NK02 468 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 F5H6K3 240 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 H3BQV1 296 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 USP2O75604 605 aaPredicted RBP10.05□□□□□ -0.8
CCDC83-202ENST00000342404 SYT1P21579 422 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 KLRC3Q07444 240 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
CCDC83-202ENST00000342404 DGKZQ13574 1117 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 VGLL4Q14135 290 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 FOXD4L6Q3SYB3 417 aaPredicted RBP10.05□□□□□ -0.8
CCDC83-202ENST00000342404 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 FOXD4L3Q6VB84 417 aaPredicted RBP10.05□□□□□ -0.8
CCDC83-202ENST00000342404 TMTC3Q6ZXV5 915 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 LDHDQ86WU2 507 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 SRBD1Q8N5C6 995 aaKnown RBP10.05□□□□□ -0.8
CCDC83-202ENST00000342404 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 VAT1LQ9HCJ6 419 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 KIF3AQ9Y496 699 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 CSADQ9Y600 493 aa10.05□□□□□ -0.8
CCDC83-202ENST00000342404 STX6O43752 255 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms