RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 H0YIN7 160 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 PDE4DQ08499 809 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
TMEM248-201ENST00000341567 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 HDXQ7Z353 690 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
TMEM248-201ENST00000341567 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
TMEM248-201ENST00000341567 TBCAO75347 108 aaKnown RBP15.16■□□□□ 0.02
TMEM248-201ENST00000341567 MECOMQ03112 1051 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 PTGDRQ13258 359 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 TNIP1Q15025 636 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 CCDC122Q5T0U0 273 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 SPAG5Q96R06 1193 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 SMCO2A6NFE2 343 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 USP27XA6NNY8 438 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 IFFO1Q0D2I5 559 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 RMND1Q9NWS8 449 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 DDX39AO00148 427 aaKnown RBP15.16■□□□□ 0.02
TMEM248-201ENST00000341567 SLF1Q9BQI6 1058 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
TMEM248-201ENST00000341567 PPIP5K2O43314 1243 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 CASP1P29466 404 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 DDIT3P35638 169 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 PLEKHA4Q9H4M7 779 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 FAM196BA6NMK8 535 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 CFBP00751 764 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
TMEM248-201ENST00000341567 SLC16A2P36021 539 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 PPP1R13BQ96KQ4 1090 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
TMEM248-201ENST00000341567 NEDD4P46934 1319 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
TMEM248-201ENST00000341567 RESTQ13127 1097 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
TMEM248-201ENST00000341567 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
TMEM248-201ENST00000341567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■■■ 36.4
TMEM248-201ENST00000341567 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
TMEM248-201ENST00000341567 TRAF5O00463 557 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 EBAG9O00559 213 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 KRT9P35527 623 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 KIF5AQ12840 1032 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 NELFCDQ8IXH7 590 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
TMEM248-201ENST00000341567 ALS2CR12Q96Q35 445 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 TCP10L2B9ZVM9 353 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 TECP42680 631 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 RNASE9P60153 205 aaKnown RBP15.14■□□□□ 0.01
TMEM248-201ENST00000341567 TTC31Q49AM3 519 aaPredicted RBP15.14■□□□□ 0.01
TMEM248-201ENST00000341567 IFT81Q8WYA0 676 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 CCDC42Q96M95 316 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 SPAG1Q07617 926 aa15.14■□□□□ 0.01
TMEM248-201ENST00000341567 ARHGEF1Q92888 912 aaKnown RBP15.14■□□□□ 0.01
TMEM248-201ENST00000341567 SH2B2O14492 632 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-201ENST00000341567 TBC1D8BQ0IIM8 1120 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 RABL6Q3YEC7 729 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-201ENST00000341567 WWC2Q6AWC2 1192 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 LINC00301Q8NCQ3 95 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 LRWD1Q9UFC0 647 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 PPP2R2CQ9Y2T4 447 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 UBR1Q8IWV7 1749 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 NEFHP12036 1026 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
TMEM248-201ENST00000341567 GYS2P54840 703 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 SNX29Q8TEQ0 813 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 DYDC1Q8WWB3 177 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 KCNF1Q9H3M0 494 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 RIPOR2Q9Y4F9 1068 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 DIP2AQ14689 1571 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 KRT86O43790 486 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 CDC27P30260 824 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.01
TMEM248-201ENST00000341567 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 CCDC174Q6PII3 467 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 SPTLC3Q9NUV7 552 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 ARPP21Q9UBL0 812 aaPredicted RBP15.13■□□□□ 0.01
TMEM248-201ENST00000341567 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 GOLGA6L7A0A1B0GV03 622 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 HSF2BPO75031 334 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 SCG2P13521 617 aa15.13■□□□□ 0.01
TMEM248-201ENST00000341567 GRM1Q13255 1194 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms