RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 SRLQ86TD4 932 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 CCDC42Q96M95 316 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 VPS16Q9H269 839 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 CCDC151A5D8V7 595 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 MAP2K2P36507 400 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 CCZ1BP86790 482 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 YY1AP1Q9H869 796 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 TAF6LQ9Y6J9 622 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 COL15A1P39059 1388 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 SDR42E1Q8WUS8 393 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
TRAK1-202ENST00000341421 FHOD1Q9Y613 1164 aa13.15□□□□□ -0.3
TRAK1-202ENST00000341421 PXDNQ92626 1479 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 TRIM66O15016 1216 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 SCG2P13521 617 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 MICALCLQ6ZW33 695 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 TULP2O00295 520 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 KRT9P35527 623 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
TRAK1-202ENST00000341421 IQCDQ96DY2 449 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 A0A087WWV3 80 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
TRAK1-202ENST00000341421 PLA2G4AP47712 749 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 NAP1L4Q99733 375 aaKnown RBP13.14□□□□□ -0.31
TRAK1-202ENST00000341421 CPDO75976 1380 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
TRAK1-202ENST00000341421 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
TRAK1-202ENST00000341421 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 GYG1P46976 350 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 SIK1P57059 783 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 CUL5Q93034 780 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 CSF1RP07333 972 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 PTPREP23469 700 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
TRAK1-202ENST00000341421 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
TRAK1-202ENST00000341421 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 LCORLQ8N3X6 602 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 PARD6BQ9BYG5 372 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAK1-202ENST00000341421 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
TRAK1-202ENST00000341421 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 GBP6Q6ZN66 633 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
TRAK1-202ENST00000341421 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 KCNJ6P48051 423 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TRAF1Q13077 416 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 HLFQ16534 295 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 LONRF3Q496Y0 759 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 DNA2P51530 1060 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 TFAP4Q01664 338 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 CYB5R4Q7L1T6 521 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
TRAK1-202ENST00000341421 NRXN3Q9Y4C0 1643 aa13.12□□□□□ -0.31
TRAK1-202ENST00000341421 H7C1D1 291 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms