RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 TANGO6Q9C0B7 1094 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 GOPCQ9HD26 462 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 GSPT1P15170 499 aaKnown RBP26.73■■□□□ 1.87
PBX1-201ENST00000340699 CCAR1Q8IX12 1150 aaKnown RBP26.73■■□□□ 1.87
PBX1-201ENST00000340699 NYAP2Q9P242 653 aa26.73■■□□□ 1.87
PBX1-201ENST00000340699 RBPJLQ9UBG7 517 aa26.73■■□□□ 1.87
PBX1-201ENST00000340699 ANAPC4Q9UJX5 808 aa26.73■■□□□ 1.87
PBX1-201ENST00000340699 RAD21O60216 631 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 SOX10P56693 466 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 PRKCZQ05513 592 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 COG2Q14746 738 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 CENPQQ7L2Z9 268 aaPredicted RBP26.72■■□□□ 1.87
PBX1-201ENST00000340699 SPICE1Q8N0Z3 855 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 ARMC5Q96C12 935 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 HOXC10Q9NYD6 342 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 RABGAP1Q9Y3P9 1069 aa26.72■■□□□ 1.87
PBX1-201ENST00000340699 WDR46O15213 610 aaKnown RBP26.71■■□□□ 1.87
PBX1-201ENST00000340699 ERVK-9P63128 1117 aa26.71■■□□□ 1.87
PBX1-201ENST00000340699 ERVK-24P63145 666 aa26.71■■□□□ 1.87
PBX1-201ENST00000340699 TFAP4Q01664 338 aa26.71■■□□□ 1.87
PBX1-201ENST00000340699 NEDD1Q8NHV4 660 aa26.71■■□□□ 1.87
PBX1-201ENST00000340699 TXNRD2Q9NNW7 524 aa26.71■■□□□ 1.87
PBX1-201ENST00000340699 ZMYM6O95789 1325 aa26.7■■□□□ 1.87
PBX1-201ENST00000340699 NEFLP07196 543 aa26.7■■□□□ 1.86
PBX1-201ENST00000340699 FAM47AQ5JRC9 791 aa26.7■■□□□ 1.86
PBX1-201ENST00000340699 KIAA1755Q5JYT7 1200 aa26.7■■□□□ 1.86
PBX1-201ENST00000340699 CLIP2Q9UDT6 1046 aa26.7■■□□□ 1.86
PBX1-201ENST00000340699 GABRQQ9UN88 632 aa26.7■■□□□ 1.86
PBX1-201ENST00000340699 GREB1LQ9C091 1923 aaPredicted RBP26.7■■□□□ 1.86
PBX1-201ENST00000340699 IGKV6D-41A0A0C4DH26 115 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 TSPY2A6NKD2 308 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 FLT3LGP49771 235 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 CCNA1P78396 465 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 LBX2Q6XYB7 198 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 TOMM22Q9NS69 142 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 MTMR4Q9NYA4 1195 aa26.69■■□□□ 1.86
PBX1-201ENST00000340699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.69■■□□□ 1.86
PBX1-201ENST00000340699 SPDYE16A6NNV3 312 aaPredicted RBP26.68■■□□□ 1.86
PBX1-201ENST00000340699 PEX10O60683 326 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 FLOT1O75955 427 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 MAPK4P31152 587 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 GRK4P32298 578 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 Q3C1V9 767 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 PPP4R3BQ5MIZ7 849 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 SH3TC2Q8TF17 1288 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 CEP95Q96GE4 821 aa26.68■■□□□ 1.86
PBX1-201ENST00000340699 CWC22Q9HCG8 908 aaKnown RBP26.68■■□□□ 1.86
PBX1-201ENST00000340699 RANBP6O60518 1105 aaKnown RBP26.67■■□□□ 1.86
PBX1-201ENST00000340699 TTLL1O95922 423 aa26.67■■□□□ 1.86
PBX1-201ENST00000340699 RUFY2Q8WXA3 655 aa26.67■■□□□ 1.86
PBX1-201ENST00000340699 ZNF333Q96JL9 665 aa26.67■■□□□ 1.86
PBX1-201ENST00000340699 INCENPQ9NQS7 918 aa26.67■■□□□ 1.86
PBX1-201ENST00000340699 PLIN4Q96Q06 1357 aa26.67■■□□□ 1.86
PBX1-201ENST00000340699 ORC4O43929 436 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 RGS19P49795 217 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 IRF5Q13568 498 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 SLAIN1Q8ND83 568 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 MKL1Q969V6 931 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 TMEM106CQ9BVX2 250 aa26.66■■□□□ 1.86
PBX1-201ENST00000340699 BIN2Q9UBW5 565 aaPredicted RBP26.66■■□□□ 1.86
PBX1-201ENST00000340699 F5H6K3 240 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 ZNF213O14771 459 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 ADCY3O60266 1144 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 CNMDO75829 334 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 DSG3P32926 999 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 HAND2P61296 217 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 KLRC3Q07444 240 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 RRP12Q5JTH9 1297 aaKnown RBP26.65■■□□□ 1.86
PBX1-201ENST00000340699 POTEEQ6S8J3 1075 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 SAMD1Q6SPF0 538 aaPredicted RBP26.65■■□□□ 1.86
PBX1-201ENST00000340699 CCDC136Q96JN2 1154 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 DSCC1Q9BVC3 393 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 SYNPO2Q9UMS6 1093 aa26.65■■□□□ 1.86
PBX1-201ENST00000340699 FGRP09769 529 aa26.64■■□□□ 1.86
PBX1-201ENST00000340699 MFSD6Q6ZSS7 791 aa26.64■■□□□ 1.86
PBX1-201ENST00000340699 MB21D1Q8N884 522 aa26.64■■□□□ 1.86
PBX1-201ENST00000340699 BTBD7Q9P203 1132 aa26.64■■□□□ 1.86
PBX1-201ENST00000340699 RAD50Q92878 1312 aa26.64■■□□□ 1.85
PBX1-201ENST00000340699 MYH4Q9Y623 1939 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 PCP11498 1178 aaKnown RBP26.63■■□□□ 1.85
PBX1-201ENST00000340699 UBXN2AP68543 259 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 FAM83BQ5T0W9 1011 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 AKNAD1Q5T1N1 836 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 PXYLP1Q8TE99 480 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 PORCNQ9H237 461 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 RNF41Q9H4P4 317 aaPredicted RBP26.63■■□□□ 1.85
PBX1-201ENST00000340699 CTNNA3Q9UI47 895 aa26.63■■□□□ 1.85
PBX1-201ENST00000340699 NDUFB10O96000 172 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 MYCP01106 439 aaPredicted RBP26.62■■□□□ 1.85
PBX1-201ENST00000340699 CHMLP26374 656 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 WDR78Q5VTH9 848 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 GPR142Q7Z601 462 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 PLEKHH3Q7Z736 793 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 NUDT12Q9BQG2 462 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 GJD2Q9UKL4 321 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 STX8Q9UNK0 236 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 TACC3Q9Y6A5 838 aa26.62■■□□□ 1.85
PBX1-201ENST00000340699 DOCK3Q8IZD9 2030 aa26.61■■□□□ 1.85
PBX1-201ENST00000340699 LRRC47Q8N1G4 583 aaKnown RBP26.61■■□□□ 1.85
PBX1-201ENST00000340699 GMCL1P1Q8NEA9 526 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms