RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 TTC38Q5R3I4 469 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 CD209Q9NNX6 404 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 NFE2L3Q9Y4A8 694 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 CYTH3O43739 400 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 SCG2P13521 617 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 CD44P16070 742 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 ADKP55263 362 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 MYL5Q02045 173 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 C12orf60Q5U649 245 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 SMARCE1Q969G3 411 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 QTRT2Q9H974 415 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 INTS13Q9NVM9 706 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 TUBE1Q9UJT0 475 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 PRPF3O43395 683 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 INF2Q27J81 1249 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 LRRC47Q8N1G4 583 aaKnown RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 RASSF8Q8NHQ8 419 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 ARPP21Q9UBL0 812 aaPredicted RBP10.11□□□□□ -0.79
SNCA-201ENST00000336904 XDHP47989 1333 aa10.11□□□□□ -0.79
SNCA-201ENST00000336904 XBP1P17861 261 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 RBM6P78332 1123 aaKnown RBP10.1□□□□□ -0.79
SNCA-201ENST00000336904 DPYDQ12882 1025 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 KARSQ15046 597 aaKnown RBP10.1□□□□□ -0.79
SNCA-201ENST00000336904 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
SNCA-201ENST00000336904 LRRN4CLQ8ND94 238 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 ATP8A2Q9NTI2 1148 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 IRS2Q9Y4H2 1338 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 SRPRBQ9Y5M8 271 aaKnown RBP10.1□□□□□ -0.79
SNCA-201ENST00000336904 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 TPM3P06753 285 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 SFPQP23246 707 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNCA-201ENST00000336904 CEP135Q66GS9 1140 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 TMEM47Q9BQJ4 181 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 PRDM10Q9NQV6 1147 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 GGA1Q9UJY5 639 aa10.1□□□□□ -0.79
SNCA-201ENST00000336904 CAVIN2O95810 425 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 ERCC3P19447 782 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
SNCA-201ENST00000336904 GJA10Q969M2 543 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
SNCA-201ENST00000336904 RTFDC1Q9BY42 306 aaPredicted RBP10.09□□□□□ -0.79
SNCA-201ENST00000336904 TEX33O43247 280 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 CCT6AP40227 531 aaKnown RBP10.09□□□□□ -0.79
SNCA-201ENST00000336904 TPM4P67936 248 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 CUL4BQ13620 913 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 PROM2Q8N271 834 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 DESI2Q9BSY9 194 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 TMEM60Q9H2L4 133 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 A0A0U1RQJ8 604 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 SMTNL1A8MU46 457 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 DYNC1I1O14576 645 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 RASA1P20936 1047 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 CDC25BP30305 580 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 ST5P78524 1137 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 TCP10Q12799 353 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 TBC1D16Q8TBP0 767 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 WDR66Q8TBY9 1149 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 PAGE5Q96GU1 130 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 EYA3Q99504 573 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 BRMS1Q9HCU9 246 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 CTNND2Q9UQB3 1225 aa10.09□□□□□ -0.79
SNCA-201ENST00000336904 SEMA3EO15041 775 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 ORC4O43929 436 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 TAL1P17542 331 aaPredicted RBP10.08□□□□□ -0.8
SNCA-201ENST00000336904 CDK8P49336 464 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 CCAR2Q8N163 923 aaKnown RBP10.08□□□□□ -0.8
SNCA-201ENST00000336904 TNFRSF25Q93038 417 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 DBNDD1Q9H9R9 158 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
SNCA-201ENST00000336904 PCNTO95613 3336 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 FLT1P17948 1338 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 DDAH1O94760 285 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 MTF1Q14872 753 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
SNCA-201ENST00000336904 TIGD1Q96MW7 591 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 MTRQ99707 1265 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
SNCA-201ENST00000336904 GDAQ9Y2T3 454 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 SBF2Q86WG5 1849 aa10.08□□□□□ -0.8
SNCA-201ENST00000336904 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 KLRF2D3W0D1 207 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 BAG3O95817 575 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 TOP1P11387 765 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms