RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 PHEXP78562 749 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 FHDC1Q9C0D6 1143 aaPredicted RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CHMP2BQ9UQN3 213 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DCTN3O75935 186 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SUN1O94901 812 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 POTEIP0CG38 1075 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 KIF21BO75037 1637 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 VMP1Q96GC9 406 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ORC3Q9UBD5 711 aaPredicted RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DDHD2O94830 711 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 RFX1P22670 979 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 E2F5Q15329 346 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ZSCAN25Q6NSZ9 544 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SPDYE1Q8NFV5 336 aaPredicted RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 STIP1P31948 543 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SCRN1Q12765 414 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 FAPQ12884 760 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 TMC6Q7Z403 805 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CUL5Q93034 780 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 KIF1BPQ96EK5 621 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CACYBPQ9HB71 228 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SPC25Q9HBM1 224 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ANO2Q9NQ90 1003 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CTNNAL1Q9UBT7 734 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 NCAPD3P42695 1498 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 TMCO5AQ8N6Q1 288 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CATSPER1Q8NEC5 780 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 TMEM110-MUSTN1A8MSY1 372 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ZNF75DP51815 510 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 TMEM110Q86TL2 294 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 IQSEC3Q9UPP2 1182 aaPredicted RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 OSBPL10Q9BXB5 764 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ATAD3AQ9NVI7 634 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 STK38LQ9Y2H1 464 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CUX2O14529 1486 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ZBTB22O15209 634 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DCTN2Q13561 401 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 PDXDC1Q6P996 788 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ZNF287Q9HBT7 754 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ESYT2A0FGR8 921 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ACTN4O43707 911 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 ETF1P62495 437 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CDR2Q01850 454 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 STMN3Q9NZ72 180 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 APOBEC2Q9Y235 224 aaKnown RBP5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DNAJC3Q13217 504 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 KRT32Q14532 448 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 LONRF2Q1L5Z9 754 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CALML6Q8TD86 181 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SPATA7Q9P0W8 599 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 SCAF11Q99590 1463 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 FESP07332 822 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 C4BPBP20851 252 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 SNX16P57768 344 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 KAZNQ674X7 775 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 C11orf91Q3C1V1 193 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 SIKE1Q9BRV8 207 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 MBD2Q9UBB5 411 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 IDO1P14902 403 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ME1P48163 572 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 PTGS1P23219 599 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 STX6O43752 255 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 EPHB4P54760 987 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 PLCB3Q01970 1234 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ITIH3Q06033 890 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 MKRN3Q13064 507 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 NFE2L1Q14494 772 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 SCAIQ8N9R8 606 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 FGFR1OPO95684 399 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 SNX32Q86XE0 403 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 TRPC7Q9HCX4 862 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 COPG1Q9Y678 874 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 MCM8Q9UJA3 840 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ADCY3O60266 1144 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 AP1G2O75843 785 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 B4DLN1 442 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 GPTP24298 496 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 CYLC1P35663 651 aaPredicted RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 HSPA13P48723 471 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 KMT5BQ4FZB7 885 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ANKRD36BP1Q96IX9 119 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 PANK3Q9H999 370 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 KCNG1Q9UIX4 513 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ATL2Q8NHH9 583 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 SLC39A3Q9BRY0 314 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 ITSN2Q9NZM3 1697 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 TTI1O43156 1089 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 CTCFP49711 727 aaPredicted RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 GALNT6Q8NCL4 622 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 CLCN6P51797 869 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 OTUD5Q96G74 571 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 TYRO3Q06418 890 aa5.87□□□□□ -1.47
TNRC6B-202ENST00000335727 IFT88Q13099 833 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms