RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SPTY2D1Q68D10 685 aaPredicted RBP20.17■□□□□ 0.82
LRCH3-201ENST00000334859 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
LRCH3-201ENST00000334859 PAGE5Q96GU1 130 aa20.17■□□□□ 0.82
LRCH3-201ENST00000334859 SAMSN1Q9NSI8 373 aaKnown RBP20.17■□□□□ 0.82
LRCH3-201ENST00000334859 KIF5BP33176 963 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 USP5P45974 858 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 FAM182BQ5T319 152 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
LRCH3-201ENST00000334859 SLU7O95391 586 aaKnown RBP20.16■□□□□ 0.82
LRCH3-201ENST00000334859 SPECC1LQ69YQ0 1117 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
LRCH3-201ENST00000334859 MED15Q96RN5 788 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 TMX1Q9H3N1 280 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 CGNQ9P2M7 1197 aaKnown RBP20.16■□□□□ 0.82
LRCH3-201ENST00000334859 SYNRGQ9UMZ2 1314 aa20.16■□□□□ 0.82
LRCH3-201ENST00000334859 LDHBP07195 334 aaKnown RBP20.15■□□□□ 0.82
LRCH3-201ENST00000334859 ERCC5P28715 1186 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-201ENST00000334859 MCM7P33993 719 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 CBX1P83916 185 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 ATP2C1P98194 919 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-201ENST00000334859 PFKFB3Q16875 520 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-201ENST00000334859 RCSD1Q6JBY9 416 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 ERO1AQ96HE7 468 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-201ENST00000334859 TM4SF1P30408 202 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 TFAP4Q01664 338 aa20.15■□□□□ 0.82
LRCH3-201ENST00000334859 SPDYE4A6NLX3 237 aa20.14■□□□□ 0.81
LRCH3-201ENST00000334859 STX17P56962 302 aa20.14■□□□□ 0.81
LRCH3-201ENST00000334859 SMYD4Q8IYR2 804 aaPredicted RBP20.14■□□□□ 0.81
LRCH3-201ENST00000334859 STAMQ92783 540 aa20.14■□□□□ 0.81
LRCH3-201ENST00000334859 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
LRCH3-201ENST00000334859 BAG1Q99933 345 aaPredicted RBP20.14■□□□□ 0.81
LRCH3-201ENST00000334859 ARHGAP6O43182 974 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 ETF1P62495 437 aaKnown RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 DPYDQ12882 1025 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 TBX2Q13207 712 aaPredicted RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 DIXDC1Q155Q3 683 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 TMED8Q6PL24 325 aaPredicted RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 DNAI1Q9UI46 699 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 IRS2Q9Y4H2 1338 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 TUBB4AP04350 444 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 CD44P16070 742 aaKnown RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 RFC4P35249 363 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 TRAPPC10P48553 1259 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 ADKP55263 362 aaKnown RBP20.13■□□□□ 0.81
LRCH3-201ENST00000334859 ELF2Q15723 593 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 TMEM139Q8IV31 216 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 WDR66Q8TBY9 1149 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 GSDMAQ96QA5 445 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 MKNK2Q9HBH9 465 aa20.13■□□□□ 0.81
LRCH3-201ENST00000334859 ADAMTS3O15072 1205 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 ZSCAN12O43309 604 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 AMOTL1Q8IY63 956 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 L2HGDHQ9H9P8 463 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 MTMR7Q9Y216 660 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 SBF2Q86WG5 1849 aa20.12■□□□□ 0.81
LRCH3-201ENST00000334859 TOM1O60784 492 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 CALML3P27482 149 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 NFIXQ14938 502 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 SPATA1Q5VX52 437 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 IQUBQ8NA54 791 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 IL17RBQ9NRM6 502 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 TC2NQ8N9U0 490 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 GPR101Q96P66 508 aaPredicted RBP20.11■□□□□ 0.81
LRCH3-201ENST00000334859 PPP2R2CQ9Y2T4 447 aa20.11■□□□□ 0.81
LRCH3-201ENST00000334859 GRAPQ13588 217 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 CUL4BQ13620 913 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 STAG2Q8N3U4 1231 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
LRCH3-201ENST00000334859 BLZF1Q9H2G9 400 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 XDHP47989 1333 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 PHLPP2Q6ZVD8 1323 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 A0A1B0GTH6 734 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 USP17L3A6NCW0 530 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 USP17L4A6NCW7 530 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 TSPY3P0CV98 308 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 TSPY8P0CW00 308 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 CT47A1Q5JQC4 288 aaPredicted RBP20.1■□□□□ 0.81
LRCH3-201ENST00000334859 USP17L1Q7RTZ2 530 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 ZNF804AQ7Z570 1209 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 DGKHQ86XP1 1220 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
LRCH3-201ENST00000334859 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
LRCH3-201ENST00000334859 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 BAG3O95817 575 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 GSTO1P78417 241 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 NR1I3Q14994 352 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 GRIK5Q16478 980 aa20.09■□□□□ 0.81
LRCH3-201ENST00000334859 REXO1L1PQ8IX06 675 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms