RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SYT10Q6XYQ8 523 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 ZNF579Q8NAF0 562 aaKnown RBP21.6■■□□□ 1.05
RFTN1-201ENST00000334133 STX8Q9UNK0 236 aa21.6■■□□□ 1.05
RFTN1-201ENST00000334133 SARSP49591 514 aaKnown RBP21.59■■□□□ 1.05
RFTN1-201ENST00000334133 PDCL2Q8N4E4 241 aa21.59■■□□□ 1.05
RFTN1-201ENST00000334133 TNFRSF25Q93038 417 aa21.59■■□□□ 1.05
RFTN1-201ENST00000334133 LRRC4BQ9NT99 713 aa21.59■■□□□ 1.05
RFTN1-201ENST00000334133 SPDYE4A6NLX3 237 aa21.59■■□□□ 1.05
RFTN1-201ENST00000334133 CD44P16070 742 aaKnown RBP21.59■■□□□ 1.05
RFTN1-201ENST00000334133 FAM177A1Q8N128 213 aaPredicted RBP21.59■■□□□ 1.05
RFTN1-201ENST00000334133 ZNF215Q9UL58 517 aaPredicted RBP21.59■■□□□ 1.05
RFTN1-201ENST00000334133 BTAF1O14981 1849 aa21.58■■□□□ 1.05
RFTN1-201ENST00000334133 ADKP55263 362 aaKnown RBP21.58■■□□□ 1.05
RFTN1-201ENST00000334133 VSTM4Q8IW00 320 aa21.58■■□□□ 1.05
RFTN1-201ENST00000334133 PNMA1Q8ND90 353 aa21.58■■□□□ 1.05
RFTN1-201ENST00000334133 PAGE5Q96GU1 130 aa21.58■■□□□ 1.05
RFTN1-201ENST00000334133 TMX1Q9H3N1 280 aa21.58■■□□□ 1.04
RFTN1-201ENST00000334133 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 HOMER1Q86YM7 354 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 FAM205AQ6ZU69 1335 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 TNRC6CQ9HCJ0 1690 aaKnown RBP21.57■■□□□ 1.04
RFTN1-201ENST00000334133 CBFA2T2O43439 604 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 GRAPQ13588 217 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 IL17AQ16552 155 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 TYW1BQ6NUM6 668 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 GRAPLQ8TC17 118 aaPredicted RBP21.57■■□□□ 1.04
RFTN1-201ENST00000334133 IRS2Q9Y4H2 1338 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.57■■□□□ 1.04
RFTN1-201ENST00000334133 GPSM2P81274 684 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 CREBRFQ8IUR6 639 aa21.57■■□□□ 1.04
RFTN1-201ENST00000334133 CBX1P83916 185 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 MLKLQ8NB16 471 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 UBE2Q2Q8WVN8 375 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 TSPY3P0CV98 308 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 TSPY8P0CW00 308 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
RFTN1-201ENST00000334133 PFKFB3Q16875 520 aaPredicted RBP21.56■■□□□ 1.04
RFTN1-201ENST00000334133 GLIPR1L2Q4G1C9 344 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 NT5DC1Q5TFE4 455 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 KIF18AQ8NI77 898 aa21.56■■□□□ 1.04
RFTN1-201ENST00000334133 UFL1O94874 794 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 SLFN14P0C7P3 912 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 SBK1Q52WX2 424 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 SPTY2D1Q68D10 685 aaPredicted RBP21.55■■□□□ 1.04
RFTN1-201ENST00000334133 MTERF4Q7Z6M4 381 aaKnown RBP21.55■■□□□ 1.04
RFTN1-201ENST00000334133 PLIN2Q99541 437 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 SLC35G1Q2M3R5 365 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 PRR5LQ6MZQ0 368 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 ANKRD7Q92527 254 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 RPGRQ92834 1020 aaKnown RBP21.55■■□□□ 1.04
RFTN1-201ENST00000334133 PRDM10Q9NQV6 1147 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 MAPK8IP1Q9UQF2 711 aa21.55■■□□□ 1.04
RFTN1-201ENST00000334133 LRRN4CLQ8ND94 238 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 MKRN1Q9UHC7 482 aaKnown RBP21.54■■□□□ 1.04
RFTN1-201ENST00000334133 TEX33O43247 280 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 FNBP4Q8N3X1 1017 aaPredicted RBP21.54■■□□□ 1.04
RFTN1-201ENST00000334133 CPLX3Q8WVH0 158 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 NRDCO43847 1150 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 ZNF18P17022 549 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 HEATR3Q7Z4Q2 680 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 WDR66Q8TBY9 1149 aa21.54■■□□□ 1.04
RFTN1-201ENST00000334133 PP2D1A8MPX8 630 aa21.53■■□□□ 1.04
RFTN1-201ENST00000334133 ATP2C1P98194 919 aaPredicted RBP21.53■■□□□ 1.04
RFTN1-201ENST00000334133 KANK3Q6NY19 840 aa21.53■■□□□ 1.04
RFTN1-201ENST00000334133 ZNF444Q8N0Y2 327 aaPredicted RBP21.53■■□□□ 1.04
RFTN1-201ENST00000334133 ENOX1Q8TC92 643 aaKnown RBP21.53■■□□□ 1.04
RFTN1-201ENST00000334133 CCDC94Q9BW85 323 aaPredicted RBP21.53■■□□□ 1.04
RFTN1-201ENST00000334133 XDHP47989 1333 aa21.53■■□□□ 1.04
RFTN1-201ENST00000334133 DPYDQ12882 1025 aa21.53■■□□□ 1.04
RFTN1-201ENST00000334133 FERMT2Q96AC1 680 aa21.53■■□□□ 1.04
RFTN1-201ENST00000334133 KIF5BP33176 963 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 DNAI1Q9UI46 699 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 CYTH3O43739 400 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 BTDP43251 543 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 ZNF804AQ7Z570 1209 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 SPATA20Q8TB22 786 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 VAT1LQ9HCJ6 419 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 DACH1Q9UI36 760 aa21.52■■□□□ 1.04
RFTN1-201ENST00000334133 PDS5AQ29RF7 1337 aaKnown RBP21.51■■□□□ 1.03
RFTN1-201ENST00000334133 CUL4BQ13620 913 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 BLIDQ8IZY5 108 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 MTRQ99707 1265 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 NOL10Q9BSC4 688 aaKnown RBP21.51■■□□□ 1.03
RFTN1-201ENST00000334133 MAD2L2Q9UI95 211 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 CCDC88AQ3V6T2 1871 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 MEX3CQ5U5Q3 659 aaKnown RBP21.51■■□□□ 1.03
RFTN1-201ENST00000334133 BAG3O95817 575 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 KARSQ15046 597 aaKnown RBP21.51■■□□□ 1.03
RFTN1-201ENST00000334133 DESI2Q9BSY9 194 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 CD209Q9NNX6 404 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 CTNND2Q9UQB3 1225 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 LEMD3Q9Y2U8 911 aa21.51■■□□□ 1.03
RFTN1-201ENST00000334133 INF2Q27J81 1249 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 SH3RF1Q7Z6J0 888 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 ELOA2Q8IYF1 753 aaPredicted RBP21.5■■□□□ 1.03
RFTN1-201ENST00000334133 TMEM47Q9BQJ4 181 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 SYNRGQ9UMZ2 1314 aa21.5■■□□□ 1.03
RFTN1-201ENST00000334133 F8W031 263 aaPredicted RBP21.5■■□□□ 1.03
RFTN1-201ENST00000334133 ELF2Q15723 593 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms