RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 SCG2P13521 617 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
CUL4A-201ENST00000326335 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 DDR1Q08345 913 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 ABCC6O95255 1503 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
CUL4A-201ENST00000326335 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 DNAI1Q9UI46 699 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 CENPFP49454 3210 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 CHRNA5P30532 468 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
CUL4A-201ENST00000326335 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
CUL4A-201ENST00000326335 XDHP47989 1333 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TEX33O43247 280 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 MMP10P09238 476 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 PIGSQ96S52 555 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 EPC1Q9H2F5 836 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 GDAQ9Y2T3 454 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 BCL9LQ86UU0 1499 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TNNI2P48788 182 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
CUL4A-201ENST00000326335 LZTFL1Q9NQ48 299 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 ABCA3Q99758 1704 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TXKP42681 527 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 CUL4BQ13620 913 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 MTF1Q14872 753 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
CUL4A-201ENST00000326335 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
CUL4A-201ENST00000326335 PTPREP23469 700 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 NCAPHQ15003 741 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TMEM60Q9H2L4 133 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 CDK8P49336 464 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 IDEP14735 1019 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TECP42680 631 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 NFIAQ12857 509 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 UBE2SQ16763 222 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
CUL4A-201ENST00000326335 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 MYH3P11055 1940 aa12.11□□□□□ -0.47
CUL4A-201ENST00000326335 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CYTH3O43739 400 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 PPP6R2O75170 966 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 GDF11O95390 407 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 KIF5BP33176 963 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 UBA7P41226 1012 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 STAT6P42226 847 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 WWC2Q6AWC2 1192 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 SLC30A10Q6XR72 485 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 LRRN4CLQ8ND94 238 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 TBC1D7Q9P0N9 293 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
CUL4A-201ENST00000326335 NRDCO43847 1150 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CCZ1BP86790 482 aa12.1□□□□□ -0.47
CUL4A-201ENST00000326335 CCZ1P86791 482 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms