RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 DUOX1Q9NRD9 1551 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 ADRA2BP18089 450 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 CUL4BQ13620 913 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 APTXQ7Z2E3 356 aaKnown RBP22.61■■□□□ 1.21
SOX2-201ENST00000325404 CCDC82Q8N4S0 544 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 PDILTQ8N807 584 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 MYH6P13533 1939 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 ZRANB2O95218 330 aaKnown RBP eCLIP22.61■■□□□ 1.21
SOX2-201ENST00000325404 USP49Q70CQ1 688 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 CMTR1Q8N1G2 835 aaKnown RBP22.61■■□□□ 1.21
SOX2-201ENST00000325404 SHISA4Q96DD7 197 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 PAGE5Q96GU1 130 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 SAMSN1Q9NSI8 373 aaKnown RBP22.61■■□□□ 1.21
SOX2-201ENST00000325404 BSDC1Q9NW68 430 aaPredicted RBP22.61■■□□□ 1.21
SOX2-201ENST00000325404 ZHX1Q9UKY1 873 aaPredicted RBP22.61■■□□□ 1.21
SOX2-201ENST00000325404 FHOD1Q9Y613 1164 aa22.61■■□□□ 1.21
SOX2-201ENST00000325404 MINDY4BA8MYZ0 360 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 AKR1B15C9JRZ8 316 aaPredicted RBP22.6■■□□□ 1.21
SOX2-201ENST00000325404 GOLGA8FQ08AF8 430 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 GOLGA8DPQ0D2H9 430 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 SLC27A3Q5K4L6 730 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 CDKAL1Q5VV42 579 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 ADGRA1Q86SQ6 560 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 GRAMD1CQ8IYS0 662 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 TNFRSF25Q93038 417 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 DLEC1Q9Y238 1755 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 PBX1P40424 430 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 IQCA1Q86XH1 822 aa22.6■■□□□ 1.21
SOX2-201ENST00000325404 TRIM37O94972 964 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 TRAPPC10P48553 1259 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 TROAPQ12815 778 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 DPYDQ12882 1025 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 IFIT1BQ5T764 474 aaKnown RBP22.59■■□□□ 1.21
SOX2-201ENST00000325404 TRMT44Q8IYL2 757 aaKnown RBP22.59■■□□□ 1.21
SOX2-201ENST00000325404 GNG11P61952 73 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 SDR42E1Q8WUS8 393 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 VPS54Q9P1Q0 977 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 MRFAP1Q9Y605 127 aa22.59■■□□□ 1.21
SOX2-201ENST00000325404 COL4A1P02462 1669 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 ADKP55263 362 aaKnown RBP22.58■■□□□ 1.21
SOX2-201ENST00000325404 TMCO3Q6UWJ1 677 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 TOGARAM2Q6ZUX3 1019 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 GPR161Q8N6U8 529 aaKnown RBP22.58■■□□□ 1.21
SOX2-201ENST00000325404 KIFC2Q96AC6 838 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 DHX58Q96C10 678 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 CCDC51Q96ER9 411 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 CARD6Q9BX69 1037 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 CACNA1SQ13698 1873 aa22.58■■□□□ 1.21
SOX2-201ENST00000325404 BRWD3Q6RI45 1802 aa22.58■■□□□ 1.2
SOX2-201ENST00000325404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.58■■□□□ 1.2
SOX2-201ENST00000325404 NPHP1O15259 732 aa22.58■■□□□ 1.2
SOX2-201ENST00000325404 TMTC3Q6ZXV5 915 aa22.58■■□□□ 1.2
SOX2-201ENST00000325404 ADD3Q9UEY8 706 aaKnown RBP22.58■■□□□ 1.2
SOX2-201ENST00000325404 CCDC175P0C221 793 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 ATP2C1P98194 919 aaPredicted RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 ZNF771Q7L3S4 317 aaPredicted RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 SYMPKQ92797 1274 aaKnown RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 PDS5AQ29RF7 1337 aaKnown RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 ITIH6Q6UXX5 1313 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 SYNRGQ9UMZ2 1314 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 A0A087X0B3 334 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 ORC4O43929 436 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 PNMA6AP0CW24 399 aaPredicted RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 ATP2B1P20020 1258 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 FECHP22830 423 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 NT5C2P49902 561 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 FILIP1LQ4L180 1135 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 EPSTI1Q96J88 318 aa22.57■■□□□ 1.2
SOX2-201ENST00000325404 V9GY48 417 aaPredicted RBP22.57■■□□□ 1.2
SOX2-201ENST00000325404 TUBB2AQ13885 445 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 TAF3Q5VWG9 929 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 ZNF772Q68DY9 489 aaPredicted RBP22.56■■□□□ 1.2
SOX2-201ENST00000325404 RSRC2Q7L4I2 434 aaKnown RBP22.56■■□□□ 1.2
SOX2-201ENST00000325404 PPFIBP1Q86W92 1011 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 WDR24Q96S15 920 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 TUBB2BQ9BVA1 445 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 PPP1R3GB7ZBB8 358 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 NPY5RQ15761 445 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 TTC38Q5R3I4 469 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 ABCF2Q9UG63 623 aa22.56■■□□□ 1.2
SOX2-201ENST00000325404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.56■■□□□ 1.2
SOX2-201ENST00000325404 ZBTB22O15209 634 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 NFIXQ14938 502 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 HSP90AA4PQ58FG1 418 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 CAVIN4Q5BKX8 364 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 EARS2Q5JPH6 523 aaKnown RBP22.55■■□□□ 1.2
SOX2-201ENST00000325404 CCDC24Q8N4L8 307 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 MINPP1Q9UNW1 487 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 LRRC10BA6NIK2 292 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 CD44P16070 742 aaKnown RBP22.55■■□□□ 1.2
SOX2-201ENST00000325404 RPS8P62241 208 aaKnown RBP22.55■■□□□ 1.2
SOX2-201ENST00000325404 PTPN21Q16825 1174 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 RABGGTAQ92696 567 aa22.55■■□□□ 1.2
SOX2-201ENST00000325404 CASZ1Q86V15 1759 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 FAM205CA6NFA0 338 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 TUBB4BP68371 445 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 IGSF22Q8N9C0 903 aa22.54■■□□□ 1.2
SOX2-201ENST00000325404 IQUBQ8NA54 791 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms