RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GREB1LQ9C091 1923 aaPredicted RBP17.84■□□□□ 0.45
PRPF3-201ENST00000324862 hCG_1642624A0A1W2PR95 340 aa17.83■□□□□ 0.45
PRPF3-201ENST00000324862 FOSBP53539 338 aa17.83■□□□□ 0.45
PRPF3-201ENST00000324862 NTRK3Q16288 839 aa17.83■□□□□ 0.45
PRPF3-201ENST00000324862 SPICE1Q8N0Z3 855 aa17.83■□□□□ 0.45
PRPF3-201ENST00000324862 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.45
PRPF3-201ENST00000324862 PTPDC1A2A3K4 754 aa17.83■□□□□ 0.44
PRPF3-201ENST00000324862 KIAA1755Q5JYT7 1200 aa17.83■□□□□ 0.44
PRPF3-201ENST00000324862 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.44
PRPF3-201ENST00000324862 ZNF112Q9UJU3 913 aa17.83■□□□□ 0.44
PRPF3-201ENST00000324862 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
PRPF3-201ENST00000324862 NT5C2P49902 561 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 PIBF1Q8WXW3 757 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
PRPF3-201ENST00000324862 CPLX1O14810 134 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
PRPF3-201ENST00000324862 DDAH1O94760 285 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 ASNSP08243 561 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
PRPF3-201ENST00000324862 DDIT3P35638 169 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 CCDC178Q5BJE1 867 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.82■□□□□ 0.44
PRPF3-201ENST00000324862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRPF3-201ENST00000324862 AIFM3Q96NN9 605 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 GJB4Q9NTQ9 266 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 NYAP2Q9P242 653 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 MAD2L2Q9UI95 211 aa17.82■□□□□ 0.44
PRPF3-201ENST00000324862 PDHBP11177 359 aa17.81■□□□□ 0.44
PRPF3-201ENST00000324862 TTLL12Q14166 644 aaPredicted RBP17.81■□□□□ 0.44
PRPF3-201ENST00000324862 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
PRPF3-201ENST00000324862 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
PRPF3-201ENST00000324862 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
PRPF3-201ENST00000324862 VGLL4Q14135 290 aa17.81■□□□□ 0.44
PRPF3-201ENST00000324862 KCTD1Q719H9 257 aa17.81■□□□□ 0.44
PRPF3-201ENST00000324862 SRBD1Q8N5C6 995 aaKnown RBP17.81■□□□□ 0.44
PRPF3-201ENST00000324862 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
PRPF3-201ENST00000324862 SCYL3Q8IZE3 742 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
PRPF3-201ENST00000324862 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
PRPF3-201ENST00000324862 MKL1Q969V6 931 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 F5H6K3 240 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 KLRC3Q07444 240 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 UBA5Q9GZZ9 404 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
PRPF3-201ENST00000324862 GPCPD1Q9NPB8 672 aa17.8■□□□□ 0.44
PRPF3-201ENST00000324862 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
PRPF3-201ENST00000324862 PPP1R12BO60237 982 aaPredicted RBP17.79■□□□□ 0.44
PRPF3-201ENST00000324862 FUT2Q10981 343 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 GRM4Q14833 912 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 SLC26A6Q9BXS9 759 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 NID2Q14112 1375 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 CYTH3O43739 400 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 NDUFB10O96000 172 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 PTPRAP18433 802 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 TMTC3Q6ZXV5 915 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
PRPF3-201ENST00000324862 SLC16A2P36021 539 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 OTUD7BQ6GQQ9 843 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 PCNTO95613 3336 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 PALM3A6NDB9 673 aaPredicted RBP17.78■□□□□ 0.44
PRPF3-201ENST00000324862 TRIM75PA6NK02 468 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 CALM1P0DP23 149 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 CALM2P0DP24 149 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 CALM3P0DP25 149 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 SPP2Q13103 211 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
PRPF3-201ENST00000324862 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
PRPF3-201ENST00000324862 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.44
PRPF3-201ENST00000324862 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
PRPF3-201ENST00000324862 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
PRPF3-201ENST00000324862 SNHG28P0DPA3 235 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 NF2P35240 595 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 RCAN1P53805 252 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 MTMR2Q13614 643 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 CCDC96Q2M329 555 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
PRPF3-201ENST00000324862 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 VAT1LQ9HCJ6 419 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 PICK1Q9NRD5 415 aa17.77■□□□□ 0.44
PRPF3-201ENST00000324862 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.43
PRPF3-201ENST00000324862 IFNAR1P17181 557 aa17.77■□□□□ 0.43
PRPF3-201ENST00000324862 SYT1P21579 422 aa17.77■□□□□ 0.43
PRPF3-201ENST00000324862 SLC1A4P43007 532 aa17.77■□□□□ 0.43
PRPF3-201ENST00000324862 GUCY1B3Q02153 619 aa17.77■□□□□ 0.43
PRPF3-201ENST00000324862 FEZ1Q99689 392 aa17.77■□□□□ 0.43
PRPF3-201ENST00000324862 V9GY48 417 aaPredicted RBP17.77■□□□□ 0.43
PRPF3-201ENST00000324862 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 CHAMP1Q96JM3 812 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 ZDHHC9Q9Y397 364 aa17.76■□□□□ 0.43
PRPF3-201ENST00000324862 CNTNAP5Q8WYK1 1306 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms