RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
SRRM1-201ENST00000323848 NLRP12P59046 1061 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 STAG1Q8WVM7 1258 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 TMEM87AQ8NBN3 555 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 FGFR2P21802 821 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 TEKT1Q969V4 418 aa15.41■□□□□ 0.06
SRRM1-201ENST00000323848 CHD2O14647 1828 aaKnown RBP15.41■□□□□ 0.06
SRRM1-201ENST00000323848 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 AP5Z1O43299 807 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CDK8P49336 464 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 ATL3Q6DD88 541 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 LEMD3Q9Y2U8 911 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 RGPD5Q99666 1765 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 VEGFAP15692 232 aaPredicted RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SHC4Q6S5L8 630 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SRBD1Q8N5C6 995 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CCDC12Q8WUD4 166 aaPredicted RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SAMSN1Q9NSI8 373 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 LRRC4BQ9NT99 713 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 EXOC1Q9NV70 894 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SORBS3O60504 671 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 UBE2SQ16763 222 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 CCDC174Q6PII3 467 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 TCHHQ07283 1943 aa15.4■□□□□ 0.06
SRRM1-201ENST00000323848 DDX39AO00148 427 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 SEPT11Q9NVA2 429 aaKnown RBP15.4■□□□□ 0.06
SRRM1-201ENST00000323848 TRIM21P19474 475 aaKnown RBP15.39■□□□□ 0.05
SRRM1-201ENST00000323848 KIF4BQ2VIQ3 1234 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 GJA10Q969M2 543 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 KCNB2Q92953 911 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 NBPF3Q9H094 633 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.058e-7■■■■■ 81.8
SRRM1-201ENST00000323848 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 CFBP00751 764 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 UBXN1Q04323 297 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
SRRM1-201ENST00000323848 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 FMR1NBQ8N0W7 255 aaPredicted RBP15.39■□□□□ 0.05
SRRM1-201ENST00000323848 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 TMEM47Q9BQJ4 181 aa15.39■□□□□ 0.05
SRRM1-201ENST00000323848 TDRD3Q9H7E2 651 aaKnown RBP15.39■□□□□ 0.05
SRRM1-201ENST00000323848 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
SRRM1-201ENST00000323848 USP17L5A8MUK1 530 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 CAVIN2O95810 425 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 GNA11P29992 359 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 PDE4DQ08499 809 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
SRRM1-201ENST00000323848 KANK3Q6NY19 840 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 REXO1Q8N1G1 1221 aaKnown RBP15.38■□□□□ 0.05
SRRM1-201ENST00000323848 STK32BQ9NY57 414 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 RNF26Q9BY78 433 aaPredicted RBP15.38■□□□□ 0.05
SRRM1-201ENST00000323848 BCL2L12Q9HB09 334 aa15.38■□□□□ 0.05
SRRM1-201ENST00000323848 GSDMDP57764 484 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 JCADQ9P266 1359 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 AOC3Q16853 763 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 UBXN4Q92575 508 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.05
SRRM1-201ENST00000323848 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 ZNF771Q7L3S4 317 aaPredicted RBP15.37■□□□□ 0.05
SRRM1-201ENST00000323848 KIFC2Q96AC6 838 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
SRRM1-201ENST00000323848 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 FOXP2O15409 715 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 BBOX1O75936 387 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 ZBTB7AO95365 584 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-201ENST00000323848 HS1BP3Q53T59 392 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 PPP4R3BQ5MIZ7 849 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 CACNA2D4Q7Z3S7 1137 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
SRRM1-201ENST00000323848 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 MATR3P43243 847 aaKnown RBP eCLIP15.36■□□□□ 0.05
SRRM1-201ENST00000323848 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 IGSF22Q8N9C0 903 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 TBC1D16Q8TBP0 767 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 MROH7-TTC4A0A0A0MT08 1334 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 MYO1BO43795 1136 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 ALDH1B1P30837 517 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 CERKQ8TCT0 537 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 LRWD1Q9UFC0 647 aa15.36■□□□□ 0.05
SRRM1-201ENST00000323848 GYS1P13807 737 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms