RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 ARHGEF10LQ9HCE6 1279 aa11.87□□□□□ -0.51
CCDC65-202ENST00000320516 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
CCDC65-202ENST00000320516 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
CCDC65-202ENST00000320516 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
CCDC65-202ENST00000320516 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
CCDC65-202ENST00000320516 EN2P19622 333 aaPredicted RBP11.86□□□□□ -0.51
CCDC65-202ENST00000320516 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 LPAR1Q92633 364 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 PORCNQ9H237 461 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 RLFQ13129 1914 aa11.86□□□□□ -0.51
CCDC65-202ENST00000320516 PLXNB2O15031 1838 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 ADCY3O60266 1144 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
CCDC65-202ENST00000320516 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 NAPBQ9H115 298 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
CCDC65-202ENST00000320516 ELNP15502 786 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 PPARAQ07869 468 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 COG2Q14746 738 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 BTBD7Q9P203 1132 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 WDR46O15213 610 aaKnown RBP11.84□□□□□ -0.51
CCDC65-202ENST00000320516 PRDM1O75626 825 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 MAPK4P31152 587 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
CCDC65-202ENST00000320516 ALX1Q15699 326 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 SPICE1Q8N0Z3 855 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 USP6NLQ92738 828 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 ZNF287Q9HBT7 754 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 HOXC10Q9NYD6 342 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 NYAP2Q9P242 653 aa11.84□□□□□ -0.51
CCDC65-202ENST00000320516 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.51
CCDC65-202ENST00000320516 INHAP05111 366 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 CCL5P13501 91 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 SDSP20132 328 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 PDE4AP27815 886 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 DSG3P32926 999 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 UBXN2AP68543 259 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 MORN1Q5T089 497 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
CCDC65-202ENST00000320516 ZNF444Q8N0Y2 327 aaPredicted RBP11.83□□□□□ -0.52
CCDC65-202ENST00000320516 RILPL2Q969X0 211 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC65-202ENST00000320516 PLIN4Q96Q06 1357 aa11.83□□□□□ -0.52
CCDC65-202ENST00000320516 GJB1P08034 283 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 CCNA1P78396 465 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 ATP2B2Q01814 1243 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 PDE4BQ07343 736 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 NEDD1Q8NHV4 660 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 SOCS4Q8WXH5 440 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 MKL1Q969V6 931 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 SHISA4Q96DD7 197 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 MTMR4Q9NYA4 1195 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 BIN2Q9UBW5 565 aaPredicted RBP11.82□□□□□ -0.52
CCDC65-202ENST00000320516 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 PARP14Q460N5 1801 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 PDE4DIPQ5VU43 2346 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 FLOT1O75955 427 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 FGAP02671 866 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
CCDC65-202ENST00000320516 FGRP09769 529 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
CCDC65-202ENST00000320516 XRCC5P13010 732 aaKnown RBP11.82□□□□□ -0.52
CCDC65-202ENST00000320516 GJA8P48165 433 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 RNF208Q9H0X6 261 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
CCDC65-202ENST00000320516 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 F5H6K3 240 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 HMGCRP04035 888 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 CYP2B6P20813 491 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 KLRC3Q07444 240 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 TRIB2Q92519 343 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 MOV10L1Q9BXT6 1211 aaKnown RBP11.81□□□□□ -0.52
CCDC65-202ENST00000320516 SPATC1LQ9H0A9 340 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
CCDC65-202ENST00000320516 FBXO28Q9NVF7 368 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 SYNPO2Q9UMS6 1093 aa11.81□□□□□ -0.52
CCDC65-202ENST00000320516 NDUFB10O96000 172 aa11.8□□□□□ -0.52
CCDC65-202ENST00000320516 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms