RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 RTEL1Q9NZ71 1219 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM55-202ENST00000315962 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-202ENST00000315962 LAMB2P55268 1798 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 KLRG2A4D1S0 409 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-202ENST00000315962 BECN2A8MW95 431 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 RAD17O75943 681 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 GSTO1P78417 241 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 ZNF174Q15697 407 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 CEP135Q66GS9 1140 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 AMOTL1Q8IY63 956 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 GRAMD1CQ8IYS0 662 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 AOPEPQ8N6M6 819 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 CEP95Q96GE4 821 aa8.73□□□□□ -1.01
TRIM55-202ENST00000315962 GPR75-ASB3A0A0A6YYF3 556 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 CCDC196A0A1B0GTZ2 297 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 DEXIO95424 95 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 LDHCP07864 332 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 SKILP12757 684 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 RASA1P20936 1047 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 SAFBQ15424 915 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRIM55-202ENST00000315962 SAMD1Q6SPF0 538 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-202ENST00000315962 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 MRPS27Q92552 414 aaKnown RBP8.72□□□□□ -1.01
TRIM55-202ENST00000315962 CAMKK2Q96RR4 588 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 MYH7P12883 1935 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 LY75O60449 1722 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 ZNF202O95125 648 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 PFKFB1P16118 471 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 CASP1P29466 404 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 ZRSR1Q15695 479 aaKnown RBP8.72□□□□□ -1.01
TRIM55-202ENST00000315962 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 PIK3AP1Q6ZUJ8 805 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 STAMQ92783 540 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 TMEM47Q9BQJ4 181 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 ZNF277Q9NRM2 450 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-202ENST00000315962 STK32BQ9NY57 414 aa8.72□□□□□ -1.01
TRIM55-202ENST00000315962 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.01
TRIM55-202ENST00000315962 ECE2O60344 883 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 NLRP5P59047 1200 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 FAM160A1Q05DH4 1040 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 FUT2Q10981 343 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 SLC35G1Q2M3R5 365 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.01
TRIM55-202ENST00000315962 ADALQ6DHV7 355 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 BRAPQ7Z569 592 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 COA1Q9GZY4 146 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 POLR3EQ9NVU0 708 aa8.71□□□□□ -1.01
TRIM55-202ENST00000315962 CLRN2A0PK11 232 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 CYTH3O43739 400 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 SLC16A2P36021 539 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
TRIM55-202ENST00000315962 SLC39A14Q15043 492 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 CDC42EP5Q6NZY7 148 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-202ENST00000315962 FAM177A1Q8N128 213 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-202ENST00000315962 ENGASEQ8NFI3 743 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 MAP3K14Q99558 947 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
TRIM55-202ENST00000315962 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.02
TRIM55-202ENST00000315962 PPIP5K2O43314 1243 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 AKR1B1P15121 316 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 MCM7P33993 719 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 PNOCQ13519 176 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 LONRF3Q496Y0 759 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 APOBEC3HQ6NTF7 200 aaKnown RBP8.7□□□□□ -1.02
TRIM55-202ENST00000315962 TMTC3Q6ZXV5 915 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 EPSTI1Q96J88 318 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 DDX19AQ9NUU7 478 aaKnown RBP8.7□□□□□ -1.02
TRIM55-202ENST00000315962 MYH2Q9UKX2 1941 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 SMTNL1A8MU46 457 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 ORC4O43929 436 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 SMC2O95347 1197 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 FGRP09769 529 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 PTPAQ15257 358 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 SBK1Q52WX2 424 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 KCNG4Q8TDN1 519 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 PLIN2Q99541 437 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 EPC1Q9H2F5 836 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 GPCPD1Q9NPB8 672 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-202ENST00000315962 DDTLA6NHG4 134 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-202ENST00000315962 KLRF2D3W0D1 207 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 COBLO75128 1261 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 SYKP43405 635 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 CRKP46108 304 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 PPP4CP60510 307 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 SNAP25P60880 206 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 PTPN14Q15678 1187 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
TRIM55-202ENST00000315962 POLR2DO15514 142 aaKnown RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 IQCB1Q15051 598 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms