RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.29
PRKDC-201ENST00000314191 DRC1Q96MC2 740 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 NMT2O60551 498 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 SP4Q02446 784 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 CACTINQ8WUQ7 758 aaKnown RBP6.96□□□□□ -1.29
PRKDC-201ENST00000314191 CLRN2A0PK11 232 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 PDE6BP35913 854 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 PRKG1Q13976 671 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 NFIXQ14938 502 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 KRT27Q7Z3Y8 459 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 SMYD4Q8IYR2 804 aaPredicted RBP6.96□□□□□ -1.29
PRKDC-201ENST00000314191 GJA3Q9Y6H8 435 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 RFX7Q2KHR2 1363 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 FDPSP14324 419 aaKnown RBP6.96□□□□□ -1.29
PRKDC-201ENST00000314191 NCAPH2Q6IBW4 605 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 LRRC8AQ8IWT6 810 aa6.96□□□□□ -1.29
PRKDC-201ENST00000314191 PXDNLA1KZ92 1463 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 CFBP00751 764 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 DLGAP5Q15398 846 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 GOLGA8FQ08AF8 430 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 GOLGA8DPQ0D2H9 430 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 STAG1Q8WVM7 1258 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 PIGSQ96S52 555 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 USP8P40818 1118 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 TRAF1Q13077 416 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 CD209Q9NNX6 404 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 POLR3GO15318 223 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-201ENST00000314191 KRT9P35527 623 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 PAFAH1B1P43034 410 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 UBN2Q6ZU65 1347 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 LZTS2Q9BRK4 669 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.3
PRKDC-201ENST00000314191 ATP1A3P13637 1013 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 CPXCR1Q8N123 301 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 NELFBQ8WX92 580 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 SRPRBQ9Y5M8 271 aaKnown RBP6.96□□□□□ -1.3
PRKDC-201ENST00000314191 BICDL2A1A5D9 508 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 ARID5BQ14865 1188 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 CTR9Q6PD62 1173 aa6.96□□□□□ -1.3
PRKDC-201ENST00000314191 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-201ENST00000314191 CTAGE15A4D2H0 777 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CTAGE8P0CG41 777 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SLC16A2P36021 539 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 NOP2P46087 812 aaKnown RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CTAGE6Q86UF2 777 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CTAGE4Q8IX94 777 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 LINC00116Q8NCU8 138 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 TBC1D7Q9P0N9 293 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC174Q6PII3 467 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SGMS1Q86VZ5 419 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SH3RF3Q8TEJ3 882 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 KCNB2Q92953 911 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 LY9Q9HBG7 655 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 TRAF5O00463 557 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 EIF3JO75822 258 aaKnown RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 GUCY1A2P33402 732 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 INTS5Q6P9B9 1019 aaKnown RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC42Q96M95 316 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 OVOS2A0A0G2JMS6 1433 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 FAM13AO94988 1023 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SF3B3Q15393 1217 aaKnown RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 WDHD1O75717 1129 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CTDNEP1O95476 244 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CDK8P49336 464 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 HERC4Q5GLZ8 1057 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 PSTPIP2Q9H939 334 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ST3GAL1Q11201 340 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 MYRIPQ8NFW9 859 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 COA7Q96BR5 231 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 KCTD1Q719H9 257 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 VPS36Q86VN1 386 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CNGA4Q8IV77 575 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 PCDHA4Q9UN74 947 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 NEK8Q86SG6 692 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CRACR2AQ9BSW2 395 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CARD6Q9BX69 1037 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ARHGAP6O43182 974 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CACNB3P54284 484 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ALX1Q15699 326 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SLFN13Q68D06 897 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 SLF1Q9BQI6 1058 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 U2AF2P26368 475 aaKnown RBP eCLIP6.95□□□□□ -1.31e-9■■■■□ 21.5
PRKDC-201ENST00000314191 ICA1Q05084 483 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 COL9A3Q14050 684 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CALCRLQ16602 461 aa6.95□□□□□ -1.3
PRKDC-201ENST00000314191 CERKLQ49MI3 558 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-201ENST00000314191 ERICH4A6NGS2 130 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC65Q8IXS2 484 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 MAN1B1Q9UKM7 699 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 TBCKQ8TEA7 893 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms