RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TRIM34Q9BYJ4 488 aa19.3■□□□□ 0.68
CLCF1-201ENST00000312438 TTLL1O95922 423 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 PARP1P09874 1014 aaKnown RBP19.29■□□□□ 0.68
CLCF1-201ENST00000312438 XRCC6P12956 609 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLCF1-201ENST00000312438 SMARCA1P28370 1054 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 SLC39A14Q15043 492 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 CIAPIN1Q6FI81 312 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
CLCF1-201ENST00000312438 MTMR14Q8NCE2 650 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 DDX19AQ9NUU7 478 aaKnown RBP19.29■□□□□ 0.68
CLCF1-201ENST00000312438 PCDHA7Q9UN72 937 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 FOCADQ5VW36 1801 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 MYH1P12882 1939 aa19.29■□□□□ 0.68
CLCF1-201ENST00000312438 MMP14P50281 582 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 TNIP1Q15025 636 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 BRMS1Q9HCU9 246 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 DACT1Q9NYF0 836 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 MTMR7Q9Y216 660 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 COL4A5P29400 1685 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 KLRF2D3W0D1 207 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 NFKBIEO00221 500 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 KRT2P35908 639 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
CLCF1-201ENST00000312438 TATDN1Q6P1N9 297 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
CLCF1-201ENST00000312438 SHISA4Q96DD7 197 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 DNAJC18Q9H819 358 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 SH3GLB2Q9NR46 395 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 ZNF70Q9UC06 446 aaPredicted RBP19.28■□□□□ 0.68
CLCF1-201ENST00000312438 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
CLCF1-201ENST00000312438 ATRNL1Q5VV63 1379 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 A0A1W2PQ27 194 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 A0A1W2PQ64 194 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 A0A1W2PQD8 194 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 MPHOSPH10O00566 681 aaKnown RBP19.27■□□□□ 0.68
CLCF1-201ENST00000312438 JMYQ8N9B5 988 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.68
CLCF1-201ENST00000312438 LTBP3Q9NS15 1303 aa19.27■□□□□ 0.67
CLCF1-201ENST00000312438 ZNF646O15015 1829 aaPredicted RBP19.26■□□□□ 0.67
CLCF1-201ENST00000312438 PPP6R2O75170 966 aa19.26■□□□□ 0.67
CLCF1-201ENST00000312438 NR5A1Q13285 461 aa19.26■□□□□ 0.67
CLCF1-201ENST00000312438 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
CLCF1-201ENST00000312438 OXER1Q8TDS5 423 aa19.26■□□□□ 0.67
CLCF1-201ENST00000312438 NUP62CLQ9H1M0 184 aa19.26■□□□□ 0.67
CLCF1-201ENST00000312438 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.26■□□□□ 0.67
CLCF1-201ENST00000312438 CYTH3O43739 400 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 NR1I2O75469 434 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 GOLGA8HP0CJ92 632 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 NLRP5P59047 1200 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 FAM151AQ8WW52 585 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 TSPY26PQ9H489 355 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 ADAMTSL1Q8N6G6 1762 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 PDHBP11177 359 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 CALML3P27482 149 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 PTPAQ15257 358 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 SPDYE2Q495Y8 402 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 FAM177A1Q8N128 213 aaPredicted RBP19.25■□□□□ 0.67
CLCF1-201ENST00000312438 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 CABP5Q9NP86 173 aa19.25■□□□□ 0.67
CLCF1-201ENST00000312438 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
CLCF1-201ENST00000312438 USP17L5A8MUK1 530 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 TCP10L2B9ZVM9 353 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 MYO1BO43795 1136 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
CLCF1-201ENST00000312438 EIF6P56537 245 aaKnown RBP19.24■□□□□ 0.67
CLCF1-201ENST00000312438 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 CSRNP1Q96S65 589 aa19.24■□□□□ 0.67
CLCF1-201ENST00000312438 CLRN2A0PK11 232 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 SLURP2P0DP57 97 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 RPS12P25398 132 aaKnown RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 NPY5RQ15761 445 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 MKL1Q969V6 931 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 RBSNQ9H1K0 784 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 TNMDQ9H2S6 317 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 CLSTN2Q9H4D0 955 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 NYAP2Q9P242 653 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 HERC5Q9UII4 1024 aaKnown RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 MAP3K11Q16584 847 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 TMEM179Q6ZVK1 233 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 FSIP1Q8NA03 581 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 ENGASEQ8NFI3 743 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 RRP36Q96EU6 259 aaKnown RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 ZBED3Q96IU2 234 aaPredicted RBP19.23■□□□□ 0.67
CLCF1-201ENST00000312438 CEP131Q9UPN4 1083 aa19.23■□□□□ 0.67
CLCF1-201ENST00000312438 FAM196BA6NMK8 535 aa19.22■□□□□ 0.67
CLCF1-201ENST00000312438 CMA1P23946 247 aa19.22■□□□□ 0.67
CLCF1-201ENST00000312438 MARCKSP29966 332 aaPredicted RBP19.22■□□□□ 0.67
CLCF1-201ENST00000312438 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
CLCF1-201ENST00000312438 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
CLCF1-201ENST00000312438 GALNT17Q6IS24 598 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms