RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 UAP1Q16222 522 aaPredicted RBP14.56□□□□□ -0.08
SNED1-201ENST00000310397 FAM89AQ96GI7 184 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 EXOC7Q9UPT5 735 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 A0A0D9SFI3 127 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 FAM207AQ9NSI2 230 aaPredicted RBP14.56□□□□□ -0.08
SNED1-201ENST00000310397 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
SNED1-201ENST00000310397 SNX29Q8TEQ0 813 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 P3H4Q92791 437 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 KLHL14Q9P2G3 628 aa14.56□□□□□ -0.08
SNED1-201ENST00000310397 TXKP42681 527 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 LONRF3Q496Y0 759 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 KLHDC4Q8TBB5 520 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 LSG1Q9H089 658 aaKnown RBP14.55□□□□□ -0.08
SNED1-201ENST00000310397 MAGEF1Q9HAY2 307 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 BCAP29Q9UHQ4 241 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 ZC3H12CQ9C0D7 883 aaKnown RBP14.55□□□□□ -0.08
SNED1-201ENST00000310397 ZNF532Q9HCE3 1301 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 NEURL1BA8MQ27 555 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 PPP6R2O75170 966 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 CEBPAP49715 358 aaPredicted RBP14.55□□□□□ -0.08
SNED1-201ENST00000310397 ANKRD20A3Q5VUR7 823 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 STAT1P42224 750 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 MAP4K1Q92918 833 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 CTTNBP2NLQ9P2B4 639 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 KDM6BO15054 1643 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
SNED1-201ENST00000310397 ITIH3Q06033 890 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 GABPB2Q8TAK5 448 aaPredicted RBP14.55□□□□□ -0.08
SNED1-201ENST00000310397 RABEP2Q9H5N1 569 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 ODF2LQ9ULJ1 636 aa14.55□□□□□ -0.08
SNED1-201ENST00000310397 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 GALNT17Q6IS24 598 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 KCNJ14Q9UNX9 436 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 MED23Q9ULK4 1368 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 CABP7Q86V35 215 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 VPS54Q9P1Q0 977 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 ADAMTS2O95450 1211 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 HSPA1LP34931 641 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 ARL1P40616 181 aaPredicted RBP14.54□□□□□ -0.08
SNED1-201ENST00000310397 MICAL1Q8TDZ2 1067 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 CARMIL3Q8ND23 1372 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 DISP1Q96F81 1524 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 KRIT1O00522 736 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 KRT15P19012 456 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 GSDMAQ96QA5 445 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 FAM204AQ9H8W3 233 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 SLC52A2Q9HAB3 445 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 TYW1Q9NV66 732 aaKnown RBP14.54□□□□□ -0.08
SNED1-201ENST00000310397 BCORL1Q5H9F3 1711 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 LONRF2Q1L5Z9 754 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 AFAP1L2Q8N4X5 818 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 TMEM87AQ8NBN3 555 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 CACTINQ8WUQ7 758 aaKnown RBP14.54□□□□□ -0.08
SNED1-201ENST00000310397 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 CCDC169A6NNP5 214 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 VGLL3A8MV65 326 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 PCP11498 1178 aaKnown RBP14.54□□□□□ -0.08
SNED1-201ENST00000310397 SNX16P57768 344 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 MAP3K21Q5TCX8 1036 aa14.54□□□□□ -0.08
SNED1-201ENST00000310397 RRP15Q9Y3B9 282 aaKnown RBP14.54□□□□□ -0.08
SNED1-201ENST00000310397 TPD52P55327 224 aaPredicted RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 MRPL44Q9H9J2 332 aaKnown RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 HSPD1P10809 573 aaKnown RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 STX2P32856 288 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 ARMC9Q7Z3E5 817 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 GDAP1L1Q96MZ0 367 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 TROVE2P10155 538 aaKnown RBP eCLIP14.53□□□□□ -0.08
SNED1-201ENST00000310397 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 SCRN1Q12765 414 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 SPATA5Q8NB90 893 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 SPTLC3Q9NUV7 552 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 NRBP1Q9UHY1 535 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 BZW2Q9Y6E2 419 aaKnown RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 DKC1O60832 514 aaKnown RBP eCLIP14.53□□□□□ -0.08
SNED1-201ENST00000310397 EIF4A1P60842 406 aaKnown RBP14.53□□□□□ -0.08
SNED1-201ENST00000310397 KCNK3O14649 394 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 GCNT3O95395 438 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 PLEKHF1Q96S99 279 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 SPHKAPQ2M3C7 1700 aa14.53□□□□□ -0.08
SNED1-201ENST00000310397 ZNF853P0CG23 659 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 ADCY7P51828 1080 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 SLC39A14Q15043 492 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 SNCBQ16143 134 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 SH2D4AQ9H788 454 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 BIRC3Q13489 604 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 RUNDC3BQ96NL0 473 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 ARHGEF35A5YM69 484 aa14.52□□□□□ -0.08
SNED1-201ENST00000310397 STK10O94804 968 aaKnown RBP14.52□□□□□ -0.08
SNED1-201ENST00000310397 CD2BP2O95400 341 aaKnown RBP14.52□□□□□ -0.09
SNED1-201ENST00000310397 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
SNED1-201ENST00000310397 LIG3P49916 1009 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms