RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MTMR7Q9Y216 660 aa20.31■□□□□ 0.84
KRT28-201ENST00000306658 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
KRT28-201ENST00000306658 GRIN3BO60391 1043 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
KRT28-201ENST00000306658 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
KRT28-201ENST00000306658 GUCY1A2P33402 732 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
KRT28-201ENST00000306658 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 KRT40Q6A162 431 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 MYH6P13533 1939 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 TCHHQ07283 1943 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
KRT28-201ENST00000306658 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
KRT28-201ENST00000306658 DDNO94850 711 aaPredicted RBP20.29■□□□□ 0.84
KRT28-201ENST00000306658 GDF11O95390 407 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 KRT85P78386 507 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 MAP3K10Q02779 954 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
KRT28-201ENST00000306658 STAG2Q8N3U4 1231 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 MKL1Q969V6 931 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 EPS15P42566 896 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 SEPT2Q15019 361 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 CLEC10AQ8IUN9 316 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 LRRC47Q8N1G4 583 aaKnown RBP20.29■□□□□ 0.84
KRT28-201ENST00000306658 GJB4Q9NTQ9 266 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 LMBRD1Q9NUN5 540 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 CNPY2Q9Y2B0 182 aa20.29■□□□□ 0.84
KRT28-201ENST00000306658 UBE2Q2LH0YL09 131 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 TRAK2O60296 914 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 GH2P01242 217 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 PDHBP11177 359 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 EEF2P13639 858 aaKnown RBP20.28■□□□□ 0.84
KRT28-201ENST00000306658 ICA1Q05084 483 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
KRT28-201ENST00000306658 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 BRAPQ7Z569 592 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 DEFB129Q9H1M3 183 aa20.28■□□□□ 0.84
KRT28-201ENST00000306658 MYH4Q9Y623 1939 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 PKN1Q16512 942 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 ATL3Q6DD88 541 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 USP17L2Q6R6M4 530 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 MIGA2Q7L4E1 593 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 CDAN1Q8IWY9 1227 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 TRPM4Q8TD43 1214 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 TEPSINQ96N21 525 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 UTRNP46939 3433 aa20.27■□□□□ 0.84
KRT28-201ENST00000306658 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.84
KRT28-201ENST00000306658 GOLGA8HP0CJ92 632 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 GNL2Q13823 731 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 ANGEL2Q5VTE6 544 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 FAM173BQ6P4H8 233 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 TMEM87AQ8NBN3 555 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 HOOK2Q96ED9 719 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 BAZ2BQ9UIF8 2168 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 MMP1P03956 469 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 SCG2P13521 617 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 RRP1BQ14684 758 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 USP48Q86UV5 1035 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 SYNPO2Q9UMS6 1093 aa20.26■□□□□ 0.83
KRT28-201ENST00000306658 SCAF8Q9UPN6 1271 aaKnown RBP20.26■□□□□ 0.83
KRT28-201ENST00000306658 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
KRT28-201ENST00000306658 FIBPO43427 364 aa20.25■□□□□ 0.83
KRT28-201ENST00000306658 CAP2P40123 477 aa20.25■□□□□ 0.83
KRT28-201ENST00000306658 SHROOM1Q2M3G4 852 aaPredicted RBP20.25■□□□□ 0.83
KRT28-201ENST00000306658 GDPD2Q9HCC8 539 aa20.25■□□□□ 0.83
KRT28-201ENST00000306658 ZC3H4Q9UPT8 1303 aaKnown RBP20.25■□□□□ 0.83
KRT28-201ENST00000306658 U2AF2P26368 475 aaKnown RBP eCLIP20.24■□□□□ 0.83
KRT28-201ENST00000306658 JAG1P78504 1218 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 SIAH1Q8IUQ4 282 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 ARHGEF10LQ9HCE6 1279 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 ZBTB21Q9ULJ3 1066 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 PPP2R3BQ9Y5P8 575 aa20.24■□□□□ 0.83
KRT28-201ENST00000306658 DDX49Q9Y6V7 483 aaKnown RBP20.24■□□□□ 0.83
KRT28-201ENST00000306658 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
KRT28-201ENST00000306658 ZNF543Q08ER8 600 aa20.23■□□□□ 0.83
KRT28-201ENST00000306658 DCAF4Q8WV16 495 aa20.23■□□□□ 0.83
KRT28-201ENST00000306658 TFIP11Q9UBB9 837 aaKnown RBP20.23■□□□□ 0.83
KRT28-201ENST00000306658 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
KRT28-201ENST00000306658 CYTH3O43739 400 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 ASNSP08243 561 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 DCAF15Q66K64 600 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 RASGRP2Q7LDG7 609 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 GMCL1P1Q8NEA9 526 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms