RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 KIAA1683Q9H0B3 1180 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
COL4A3-201ENST00000304990 RARBP10826 455 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 EPHB4P54760 987 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 PPP4CP60510 307 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 CERKLQ49MI3 558 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 CCDC158Q5M9N0 1113 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 RNF180Q86T96 592 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 UHRF1Q96T88 793 aaPredicted RBP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 MEIS3Q99687 375 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 MOV10L1Q9BXT6 1211 aaKnown RBP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
COL4A3-201ENST00000304990 HOXC10Q9NYD6 342 aa12.33□□□□□ -0.44
COL4A3-201ENST00000304990 E9PSI1 815 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 ERCC3P19447 782 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 IGFBP4P22692 258 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
COL4A3-201ENST00000304990 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
COL4A3-201ENST00000304990 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 COG2Q14746 738 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-201ENST00000304990 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 ACER1Q8TDN7 264 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 SERPINB13Q9UIV8 391 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 ZNFX1Q9P2E3 1918 aaKnown RBP12.32□□□□□ -0.44
COL4A3-201ENST00000304990 EYSQ5T1H1 3165 aa12.32□□□□□ -0.44
COL4A3-201ENST00000304990 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 APBB1O00213 710 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 MPHOSPH10O00566 681 aaKnown RBP12.31□□□□□ -0.44
COL4A3-201ENST00000304990 KIAA0355O15063 1070 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 COBLO75128 1261 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 PGK1P00558 417 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 GNAI3P08754 354 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 CYP7A1P22680 504 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 ITGB8P26012 769 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 ADGRA1Q86SQ6 560 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 SLC44A5Q8NCS7 719 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 SHCBP1Q8NEM2 672 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-201ENST00000304990 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 MROH8Q9H579 483 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
COL4A3-201ENST00000304990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-201ENST00000304990 VCANP13611 3396 aa12.31□□□□□ -0.44
COL4A3-201ENST00000304990 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-201ENST00000304990 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 FCER1AP12319 257 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 OS9Q13438 667 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-201ENST00000304990 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 MIGA1Q8NAN2 632 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 MAML3Q96JK9 1138 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
COL4A3-201ENST00000304990 MYH8P13535 1937 aa12.29□□□□□ -0.44
COL4A3-201ENST00000304990 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
COL4A3-201ENST00000304990 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A3-201ENST00000304990 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
COL4A3-201ENST00000304990 MB21D1Q8N884 522 aa12.29□□□□□ -0.44
COL4A3-201ENST00000304990 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
COL4A3-201ENST00000304990 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A3-201ENST00000304990 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 NAV1Q8NEY1 1877 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 GRXCR1A8MXD5 290 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
COL4A3-201ENST00000304990 FLOT1O75955 427 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 IGHA2P01877 340 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 CYP2E1P05181 493 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-201ENST00000304990 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-201ENST00000304990 PBX2P40425 430 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 SEPT2Q15019 361 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 CERS3Q8IU89 383 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 MIER1Q8N108 512 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 VTI1AQ96AJ9 217 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 MMP19Q99542 508 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 C1QTNF1Q9BXJ1 281 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 EHD4Q9H223 541 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
COL4A3-201ENST00000304990 GBF1Q92538 1859 aa12.27□□□□□ -0.44
COL4A3-201ENST00000304990 TCF20Q9UGU0 1960 aaKnown RBP12.27□□□□□ -0.44
COL4A3-201ENST00000304990 TIMP1P01033 207 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 AKR1A1P14550 325 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 ZAP70P43403 619 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 FAAP100Q0VG06 881 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 KCTD2Q14681 263 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms