RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 ERFP50548 548 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 POLE2P56282 527 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 FAF1Q9UNN5 650 aaPredicted RBP13.65□□□□□ -0.22
ABCA3-201ENST00000301732 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
ABCA3-201ENST00000301732 TNNI1P19237 187 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 C2orf54Q08AI8 447 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
ABCA3-201ENST00000301732 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 SUDS3Q9H7L9 328 aaPredicted RBP13.65□□□□□ -0.22
ABCA3-201ENST00000301732 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 GUCY2DQ02846 1103 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 hCG_2014768A0A024R1R8 64 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 KRT40Q6A162 431 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 TTBK2Q6IQ55 1244 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 HIPK4Q8NE63 616 aa13.65□□□□□ -0.22
ABCA3-201ENST00000301732 ARHGAP25P42331 645 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 TRIP13Q15645 432 aaPredicted RBP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 HS1BP3Q53T59 392 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 LBHD1Q9BQE6 289 aaPredicted RBP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 MRFAP1Q9Y605 127 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 CABP7Q86V35 215 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 SKA2Q8WVK7 121 aaPredicted RBP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 PAGR1Q9BTK6 254 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 BRD3Q15059 726 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 TRIM4Q9C037 500 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 LRWD1Q9UFC0 647 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 ITGA6P23229 1130 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 GPKOWQ92917 476 aaPredicted RBP eCLIP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 SLC39A2Q9NP94 309 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 CALUO43852 315 aaPredicted RBP13.64□□□□□ -0.23
ABCA3-201ENST00000301732 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 GRAMD1CQ8IYS0 662 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 CHMP6Q96FZ7 201 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 MAD1L1Q9Y6D9 718 aa13.64□□□□□ -0.23
ABCA3-201ENST00000301732 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 WDR46O15213 610 aaKnown RBP13.63□□□□□ -0.23
ABCA3-201ENST00000301732 CALCRLQ16602 461 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 FAM71BQ8TC56 605 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 GSTA1P08263 222 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 GSTA2P09210 222 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 POLR2FP61218 127 aaKnown RBP13.63□□□□□ -0.23
ABCA3-201ENST00000301732 IRX4P78413 519 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 RASSF7Q02833 373 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 STRN3Q13033 797 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
ABCA3-201ENST00000301732 RASSF2P50749 326 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 EP400NLQ6ZTU2 488 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 MSANTD4Q8NCY6 345 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 EHHADHQ08426 723 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 DLATP10515 647 aaKnown RBP13.63□□□□□ -0.23
ABCA3-201ENST00000301732 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 CYTH2Q99418 400 aa13.63□□□□□ -0.23
ABCA3-201ENST00000301732 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 THAP12O43422 761 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 PFKFB1P16118 471 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 GABPB1Q06547 395 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 KCNJ18B7U540 433 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 HIP1RO75146 1068 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 ZAP70P43403 619 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 TGFBRAP1Q8WUH2 860 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 MPHOSPH6Q99547 160 aaKnown RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 PTH1RQ03431 593 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 MYLK4Q86YV6 388 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 KLHL14Q9P2G3 628 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 DEXIO95424 95 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 UBXN2AP68543 259 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 CCDC127Q96BQ5 260 aa13.62□□□□□ -0.23
ABCA3-201ENST00000301732 CSRNP2Q9H175 543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms