RNA–Protein interactions for RNA: ENST00000299338.10

FAM227B-201, Transcript of family with sequence similarity 227 member B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FAM227B, Length 2,008 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-201ENST00000299338 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.84■□□□□ 0.61
FAM227B-201ENST00000299338 PGAP2Q9UHJ9 254 aa18.84■□□□□ 0.61
FAM227B-201ENST00000299338 HERC5Q9UII4 1024 aaKnown RBP18.84■□□□□ 0.61
FAM227B-201ENST00000299338 RAD21O60216 631 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.61
FAM227B-201ENST00000299338 GH2P01242 217 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.61
FAM227B-201ENST00000299338 SYT1P21579 422 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 SEPT2Q15019 361 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 LARP1BQ659C4 914 aaKnown RBP18.83■□□□□ 0.61
FAM227B-201ENST00000299338 LRRC47Q8N1G4 583 aaKnown RBP18.83■□□□□ 0.61
FAM227B-201ENST00000299338 CCDC17Q96LX7 622 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 LLPHQ9BRT6 129 aaKnown RBP18.83■□□□□ 0.61
FAM227B-201ENST00000299338 FZD1Q9UP38 647 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 SIPA1L1O43166 1804 aa18.83■□□□□ 0.61
FAM227B-201ENST00000299338 NT5C2P49902 561 aa18.83■□□□□ 0.6
FAM227B-201ENST00000299338 TAF3Q5VWG9 929 aa18.83■□□□□ 0.6
FAM227B-201ENST00000299338 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.83■□□□□ 0.6
FAM227B-201ENST00000299338 COL2A1P02458 1487 aaPredicted RBP18.82■□□□□ 0.6
FAM227B-201ENST00000299338 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
FAM227B-201ENST00000299338 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
FAM227B-201ENST00000299338 FOXD4L6Q3SYB3 417 aaPredicted RBP18.82■□□□□ 0.6
FAM227B-201ENST00000299338 EAPPQ56P03 285 aaPredicted RBP18.82■□□□□ 0.6
FAM227B-201ENST00000299338 FOXD4L3Q6VB84 417 aaPredicted RBP18.82■□□□□ 0.6
FAM227B-201ENST00000299338 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
FAM227B-201ENST00000299338 ZDHHC9Q9Y397 364 aa18.82■□□□□ 0.6
FAM227B-201ENST00000299338 FDPSP14324 419 aaKnown RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 APOBEC3FQ8IUX4 373 aaKnown RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 CABP5Q9NP86 173 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 STX6O43752 255 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 PLEKHA8P1O95397 391 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 BAG4O95429 457 aaKnown RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 TTLL1O95922 423 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 EPHX2P34913 555 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 NUCB2P80303 420 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 PIBF1Q8WXW3 757 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 PRIMPOLQ96LW4 560 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 SLC26A6Q9BXS9 759 aa18.81■□□□□ 0.6
FAM227B-201ENST00000299338 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
FAM227B-201ENST00000299338 hCG_1642624A0A1W2PR95 340 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 DDAH1O94760 285 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 CALM1P0DP23 149 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 CALM2P0DP24 149 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 CALM3P0DP25 149 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
FAM227B-201ENST00000299338 EEF2P13639 858 aaKnown RBP18.8■□□□□ 0.6
FAM227B-201ENST00000299338 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 HMGN5P82970 282 aaKnown RBP18.8■□□□□ 0.6
FAM227B-201ENST00000299338 PRKG1Q13976 671 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 NTRK3Q16288 839 aa18.8■□□□□ 0.6
FAM227B-201ENST00000299338 L3MBTL3Q96JM7 780 aaPredicted RBP18.8■□□□□ 0.6
FAM227B-201ENST00000299338 CCDC196A0A1B0GTZ2 297 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 GUCY1B3Q02153 619 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 MYRIPQ8NFW9 859 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
FAM227B-201ENST00000299338 AIFM3Q96NN9 605 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 PLIN4Q96Q06 1357 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 CDKL5O76039 1030 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 ICA1Q05084 483 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 CCDC84Q86UT8 332 aaPredicted RBP18.79■□□□□ 0.6
FAM227B-201ENST00000299338 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
FAM227B-201ENST00000299338 ADM5C9JUS6 153 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 TBC1D12O60347 775 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.6
FAM227B-201ENST00000299338 SSRP1Q08945 709 aaKnown RBP18.78■□□□□ 0.6
FAM227B-201ENST00000299338 OTUD7BQ6GQQ9 843 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 CHAMP1Q96JM3 812 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
FAM227B-201ENST00000299338 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 POTECB2RU33 542 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 PDE4CQ08493 712 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
FAM227B-201ENST00000299338 FRMPD2Q68DX3 1309 aaPredicted RBP18.77■□□□□ 0.6
FAM227B-201ENST00000299338 H3BQV1 296 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 BRD1O95696 1058 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 IFNAR1P17181 557 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 RCAN1P53805 252 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 CDC37L1Q7L3B6 337 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 NBPF11Q86T75 865 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 SIAH1Q8IUQ4 282 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 SULF1Q8IWU6 871 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 SRBD1Q8N5C6 995 aaKnown RBP18.77■□□□□ 0.6
FAM227B-201ENST00000299338 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
FAM227B-201ENST00000299338 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
FAM227B-201ENST00000299338 MYH8P13535 1937 aa18.77■□□□□ 0.59
FAM227B-201ENST00000299338 PDCP20941 246 aa18.76■□□□□ 0.59
FAM227B-201ENST00000299338 CAP2P40123 477 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms