RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
FOXN4-201ENST00000299162 MYH2Q9UKX2 1941 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 FANCCQ00597 558 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 TROAPQ12815 778 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 ERCC6LQ2NKX8 1250 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 PRR5LQ6MZQ0 368 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
FOXN4-201ENST00000299162 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 CUTAO60888 179 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 TM4SF1P30408 202 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 PKN1Q16512 942 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 RILPL1Q5EBL4 403 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 RESP18Q5W5W9 173 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
FOXN4-201ENST00000299162 G3V3G9 751 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 SERPINB2P05120 415 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 TPM3P06753 285 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 DCAF8Q5TAQ9 597 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 PLCH1Q4KWH8 1693 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 PES1O00541 588 aaKnown RBP11.5□□□□□ -0.57
FOXN4-201ENST00000299162 HSPA1LP34931 641 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 SCNN1DP51172 638 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 GTF2IP78347 998 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 PTGDRQ13258 359 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 POSTNQ15063 836 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 PNMA1Q8ND90 353 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
FOXN4-201ENST00000299162 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 BRMS1Q9HCU9 246 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
FOXN4-201ENST00000299162 PPP6R2O75170 966 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 BTDP43251 543 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
FOXN4-201ENST00000299162 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
FOXN4-201ENST00000299162 BMP6P22004 513 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 SFPQP23246 707 aaKnown RBP eCLIP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 GABPB1Q06547 395 aaPredicted RBP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 GRAPQ13588 217 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 AMOTL1Q8IY63 956 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 TEX11Q8IYF3 940 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 GRAPLQ8TC17 118 aaPredicted RBP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 A0A087X0B3 334 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 UBA5Q9GZZ9 404 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 FEZ2Q9UHY8 353 aaPredicted RBP11.49□□□□□ -0.57
FOXN4-201ENST00000299162 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
FOXN4-201ENST00000299162 CAVIN2O95810 425 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 MYL5Q02045 173 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 TMTC3Q6ZXV5 915 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 ZNF397Q8NF99 534 aaPredicted RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 FOXP1Q9H334 677 aaPredicted RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 PP2D1A8MPX8 630 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 NCAPHQ15003 741 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 USP17L2Q6R6M4 530 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 CCDC34Q96HJ3 373 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 MAN1B1Q9UKM7 699 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 PTPREP23469 700 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 FAM43BQ6ZT52 329 aaPredicted RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 C10orf67Q8IYJ2 551 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 EPC1Q9H2F5 836 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 GGA1Q9UJY5 639 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 HPSEQ9Y251 543 aa11.48□□□□□ -0.57
FOXN4-201ENST00000299162 FRMPD2Q68DX3 1309 aaPredicted RBP11.48□□□□□ -0.57
FOXN4-201ENST00000299162 BAG3O95817 575 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 SCG2P13521 617 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 CACNB3P54284 484 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 GYS2P54840 703 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ST5P78524 1137 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 SYT10Q6XYQ8 523 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 LRRN4CLQ8ND94 238 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 FAM196BA6NMK8 535 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 INF2Q27J81 1249 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ARMCX5Q6P1M9 558 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.47□□□□□ -0.57
FOXN4-201ENST00000299162 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 ATP8A2Q9NTI2 1148 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 STK36Q9NRP7 1315 aa11.47□□□□□ -0.57
FOXN4-201ENST00000299162 AHDC1Q5TGY3 1603 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms