RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MIGA1Q8NAN2 632 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MED15Q96RN5 788 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MYO1AQ9UBC5 1043 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 HPCAL4Q9UM19 191 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 ACTN4O43707 911 aaKnown RBP12.82□□□□□ -0.36
TRUB1-201ENST00000298746 HSF2BPO75031 334 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MCM7P33993 719 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 SLC7A5Q01650 507 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MCTP2Q6DN12 878 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
TRUB1-201ENST00000298746 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
TRUB1-201ENST00000298746 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 IFNAR1P17181 557 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
TRUB1-201ENST00000298746 CPDO75976 1380 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 OPA1O60313 960 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 PDE6AP16499 860 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 MCAMP43121 646 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 GIMAP7Q8NHV1 300 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 KRT23Q9C075 422 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
TRUB1-201ENST00000298746 TTC26A0AVF1 554 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 CXCR5P32302 372 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 KRT2P35908 639 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 MTIF2P46199 727 aaKnown RBP12.8□□□□□ -0.36
TRUB1-201ENST00000298746 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 FOXP2O15409 715 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 ERCC3P19447 782 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 ADD2P35612 726 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 CDR1P51861 262 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 TRIM14Q14142 442 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
TRUB1-201ENST00000298746 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
TRUB1-201ENST00000298746 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 EXOC5O00471 708 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 ATP2C2O75185 946 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 SYF2O95926 243 aaKnown RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 IRAK1P51617 712 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 NLRP5P59047 1200 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PPARAQ07869 468 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PDCLQ13371 301 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 NTRK3Q16288 839 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 IFNL3Q8IZI9 196 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 FBXL16Q8N461 479 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 CNNM2Q9H8M5 875 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 TRIM49BA6NDI0 452 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 USO1O60763 962 aaKnown RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 STAT6P42226 847 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PTGDRQ13258 359 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 SLIT1O75093 1534 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PRKAB2O43741 272 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 AKR1B10O60218 316 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 ZPR1O75312 459 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 SSBP05455 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 PPFIA1Q13136 1202 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 GBP6Q6ZN66 633 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
TRUB1-201ENST00000298746 JPH2Q9BR39 696 aaPredicted RBP12.79□□□□□ -0.36
TRUB1-201ENST00000298746 FAM237AA0A1B0GTK4 181 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 RNASE9P60153 205 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
TRUB1-201ENST00000298746 TCP11X2Q5H9J9 407 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 A0A087X0B3 334 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 TACC1O75410 805 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 RPS6KA5O75582 802 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 ARHGAP25P42331 645 aa12.78□□□□□ -0.36
TRUB1-201ENST00000298746 PHKA1P46020 1223 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms