RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NUP98P52948 1817 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
UBAP1-201ENST00000297661 IKBKBO14920 756 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 CUTAO60888 179 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 PRDM1O75626 825 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
UBAP1-201ENST00000297661 ARHGAP6O43182 974 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 IL6STP40189 918 aaPredicted RBP17.7■□□□□ 0.42
UBAP1-201ENST00000297661 FMR1Q06787 632 aaKnown RBP eCLIP17.7■□□□□ 0.42
UBAP1-201ENST00000297661 BRD3Q15059 726 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 ALX1Q15699 326 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 DHX58Q96C10 678 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
UBAP1-201ENST00000297661 IFNAR1P17181 557 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 CYP7A1P22680 504 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBAP1-201ENST00000297661 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 ZSWIM4Q9H7M6 989 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 INTS13Q9NVM9 706 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
UBAP1-201ENST00000297661 TOP1P11387 765 aaKnown RBP17.69■□□□□ 0.42
UBAP1-201ENST00000297661 CASP1P29466 404 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 GYG1P46976 350 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 EVX2Q03828 476 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 TMEM139Q8IV31 216 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
UBAP1-201ENST00000297661 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 KRT23Q9C075 422 aa17.69■□□□□ 0.42
UBAP1-201ENST00000297661 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
UBAP1-201ENST00000297661 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
UBAP1-201ENST00000297661 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 FBXO2Q9UK22 296 aaPredicted RBP17.68■□□□□ 0.42
UBAP1-201ENST00000297661 MAN1B1Q9UKM7 699 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 NIP7Q9Y221 180 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBAP1-201ENST00000297661 ERICH2A1L162 156 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 GOLGA6L9A6NEM1 432 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 CHRNDQ07001 517 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
UBAP1-201ENST00000297661 N4BP1O75113 896 aaKnown RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 PPARAQ07869 468 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 POSTNQ15063 836 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 BEND6Q5SZJ8 279 aaPredicted RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 STAG1Q8WVM7 1258 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 MYCBPQ99417 103 aaPredicted RBP17.67■□□□□ 0.42
UBAP1-201ENST00000297661 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 FAN1Q9Y2M0 1017 aa17.67■□□□□ 0.42
UBAP1-201ENST00000297661 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
UBAP1-201ENST00000297661 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
UBAP1-201ENST00000297661 HDXQ7Z353 690 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 ANKRD65E5RJM6 399 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 TNKSO95271 1327 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 ZBTB7AO95365 584 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
UBAP1-201ENST00000297661 ADKP55263 362 aaKnown RBP17.66■□□□□ 0.42
UBAP1-201ENST00000297661 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 BAG1Q99933 345 aaPredicted RBP17.66■□□□□ 0.42
UBAP1-201ENST00000297661 CSRNP2Q9H175 543 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 NFE2L3Q9Y4A8 694 aa17.66■□□□□ 0.42
UBAP1-201ENST00000297661 STK36Q9NRP7 1315 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 FAM237AA0A1B0GTK4 181 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 WNT7AO00755 349 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 COBLO75128 1261 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 RPS6KA4O75676 772 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 SLC4A8Q2Y0W8 1093 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 TRAPPC3LQ5T215 181 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 TOGARAM2Q6ZUX3 1019 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
UBAP1-201ENST00000297661 HNRNPLLQ8WVV9 542 aaKnown RBP17.65■□□□□ 0.42
UBAP1-201ENST00000297661 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 BAZ2BQ9UIF8 2168 aaKnown RBP17.65■□□□□ 0.42
UBAP1-201ENST00000297661 COL4A1P02462 1669 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 PTPREP23469 700 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 RFC4P35249 363 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 AFMP43652 599 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 CORO7P57737 925 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 CHMP4BP1P59074 171 aa17.65■□□□□ 0.42
UBAP1-201ENST00000297661 SECISBP2LQ93073 1101 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms