RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CYP4A11Q02928 519 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 TNNI1P19237 187 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 GBP6Q6ZN66 633 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 SNX1Q13596 522 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 CD19P15391 556 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
FNDC1-201ENST00000297267 C2orf54Q08AI8 447 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 MEIS1O00470 390 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 DLATP10515 647 aaKnown RBP17.13■□□□□ 0.33
FNDC1-201ENST00000297267 SLC16A2P36021 539 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
FNDC1-201ENST00000297267 USP37Q86T82 979 aa17.13■□□□□ 0.33
FNDC1-201ENST00000297267 PCK1P35558 622 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 PLCD1P51178 756 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 NKIRAS1Q9NYS0 192 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 KBTBD3Q8NAB2 608 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 STX10O60499 249 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
FNDC1-201ENST00000297267 EAF2Q96CJ1 260 aaPredicted RBP17.12■□□□□ 0.33
FNDC1-201ENST00000297267 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 PRPHP41219 470 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 APOL6Q9BWW8 343 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 MAGEA1P43355 309 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 POLR2FP61218 127 aaKnown RBP17.12■□□□□ 0.33
FNDC1-201ENST00000297267 ITIH3Q06033 890 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 STMN2Q93045 179 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
FNDC1-201ENST00000297267 LARGE1O95461 756 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 SYMPKQ92797 1274 aaKnown RBP17.12■□□□□ 0.33
FNDC1-201ENST00000297267 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 GREM2Q9H772 168 aa17.12■□□□□ 0.33
FNDC1-201ENST00000297267 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
FNDC1-201ENST00000297267 CTSWP56202 376 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 EYA3Q99504 573 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 STMN4Q9H169 189 aaPredicted RBP17.11■□□□□ 0.33
FNDC1-201ENST00000297267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
FNDC1-201ENST00000297267 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 GYS2P54840 703 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 ATP11AP98196 1134 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
FNDC1-201ENST00000297267 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PRKAB2O43741 272 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 DCUN1D2Q6PH85 259 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 SPATA24Q86W54 205 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 LMTK3Q96Q04 1460 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 TMOD4Q9NZQ9 345 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
FNDC1-201ENST00000297267 PZPP20742 1482 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 KDRP35968 1356 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 B4DLN1 442 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 KRT15P19012 456 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 ATF7P17544 494 aaPredicted RBP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 RASSF7Q02833 373 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 TTF2Q9UNY4 1162 aaKnown RBP17.1■□□□□ 0.33
FNDC1-201ENST00000297267 Q3C1V9 767 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 VPS52Q8N1B4 723 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 RILPQ96NA2 401 aa17.1■□□□□ 0.33
FNDC1-201ENST00000297267 INPP5BP32019 993 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 SMAD1Q15797 465 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 LARGE2Q8N3Y3 721 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 TSPOAP1O95153 1857 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 HSPD1P10809 573 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 CLNS1AP54105 237 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 NXNQ6DKJ4 435 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms