RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SOGA3Q5TF21 947 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
PRDM9-201ENST00000296682 SRBD1Q8N5C6 995 aaKnown RBP10.62□□□□□ -0.71
PRDM9-201ENST00000296682 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 EP400Q96L91 3159 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
PRDM9-201ENST00000296682 SPTLC3Q9NUV7 552 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 CEP131Q9UPN4 1083 aa10.62□□□□□ -0.71
PRDM9-201ENST00000296682 KIF5BP33176 963 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 NLRP12P59046 1061 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 TTC38Q5R3I4 469 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 KIAA1524Q8TCG1 905 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 A0A1W2PQD8 194 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 CUTAO60888 179 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 NAPAP54920 295 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 GRAPQ13588 217 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 INF2Q27J81 1249 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 KRBA2Q6ZNG9 492 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 DHX40Q8IX18 779 aaKnown RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 GRAPLQ8TC17 118 aaPredicted RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 NFE2L3Q9Y4A8 694 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 USP27XA6NNY8 438 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 RIOK3O14730 519 aaKnown RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 CAVIN2O95810 425 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 TOB1P50616 345 aaPredicted RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 POSTNQ15063 836 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 CCDC112Q8NEF3 446 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 CD209Q9NNX6 404 aa10.61□□□□□ -0.71
PRDM9-201ENST00000296682 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
PRDM9-201ENST00000296682 RCAN1P53805 252 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 ELOA2Q8IYF1 753 aaPredicted RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 EYA3Q99504 573 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 ZHX3Q9H4I2 956 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 PNPLA7Q6ZV29 1317 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 CCT6AP40227 531 aaKnown RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 RBM17Q96I25 401 aaKnown RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 IRS2Q9Y4H2 1338 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 UBA7P41226 1012 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 ADKP55263 362 aaKnown RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 MYL5Q02045 173 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 RRAGBQ5VZM2 374 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 DPF2Q92785 391 aa10.6□□□□□ -0.71
PRDM9-201ENST00000296682 SEC63Q9UGP8 760 aaKnown RBP10.6□□□□□ -0.71
PRDM9-201ENST00000296682 XDHP47989 1333 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 SCG2P13521 617 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 LRRC8AQ8IWT6 810 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 ATP8A2Q9NTI2 1148 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 BIN2Q9UBW5 565 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 TRPC5Q9UL62 973 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 WNT7AO00755 349 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 SLC16A2P36021 539 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 FOXP4Q8IVH2 680 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 RGPD3A6NKT7 1758 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 RGPD4Q7Z3J3 1758 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 FGRP09769 529 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 TXLNAP40222 546 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 KARSQ15046 597 aaKnown RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 DPP8Q6V1X1 898 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
PRDM9-201ENST00000296682 METTL16Q86W50 562 aaKnown RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 ARPP21Q9UBL0 812 aaPredicted RBP10.59□□□□□ -0.71
PRDM9-201ENST00000296682 TAF1P21675 1872 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 GSTO1P78417 241 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 TROAPQ12815 778 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 PTPAQ15257 358 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 ZSWIM4Q9H7M6 989 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 PRDM10Q9NQV6 1147 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
PRDM9-201ENST00000296682 CALM1P0DP23 149 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 CALM2P0DP24 149 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 CALM3P0DP25 149 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 IDEP14735 1019 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 CDC25BP30305 580 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 SARM1Q6SZW1 724 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 BRIP1Q9BX63 1249 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
PRDM9-201ENST00000296682 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
PRDM9-201ENST00000296682 ADAMTS3O15072 1205 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 MMP10P09238 476 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 STAT6P42226 847 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 COA7Q96BR5 231 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 VPS16Q9H269 839 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 STK36Q9NRP7 1315 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 GYS1P13807 737 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRDM9-201ENST00000296682 TXKP42681 527 aa10.57□□□□□ -0.72
PRDM9-201ENST00000296682 TNNI2P48788 182 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms