RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DENND2CQ68D51 928 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 U2AF1L4Q8WU68 220 aaKnown RBP17■□□□□ 0.31
SHROOM4-201ENST00000289292 BTBD18B2RXH4 712 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 ALDH3A1P30838 453 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
SHROOM4-201ENST00000289292 RBL2Q08999 1139 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 BCAS4Q8TDM0 211 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 SDR42E1Q8WUS8 393 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 MYCBPQ99417 103 aaPredicted RBP17■□□□□ 0.31
SHROOM4-201ENST00000289292 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17■□□□□ 0.31
SHROOM4-201ENST00000289292 TRIM68Q6AZZ1 485 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 IL17REQ8NFR9 667 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 ARHGEF10O15013 1369 aa17■□□□□ 0.31
SHROOM4-201ENST00000289292 KDRP35968 1356 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 TAOK1Q7L7X3 1001 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 MRPL44Q9H9J2 332 aaKnown RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 MYCT1Q8N699 235 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 KIFAP3Q92845 792 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 FAM169AQ9Y6X4 670 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 OR8K1Q8NGG5 319 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 GOLGA8KD6RF30 607 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 ADCY7P51828 1080 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 SEPT14Q6ZU15 432 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 M0R2C6 588 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 DDB1Q16531 1140 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 INF2Q27J81 1249 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 RRP15Q9Y3B9 282 aaKnown RBP16.99■□□□□ 0.31
SHROOM4-201ENST00000289292 HSPA1LP34931 641 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 PLCG2P16885 1265 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 GCKP35557 465 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 RASA3Q14644 834 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 WDR44Q5JSH3 913 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 CACNA2D3Q8IZS8 1091 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 ANKRD13CQ8N6S4 541 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 DDX17Q92841 729 aaKnown RBP16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 FNBP1Q96RU3 617 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 GYS2P54840 703 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 C2orf54Q08AI8 447 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 BACH1O14867 736 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 LPIN2Q92539 896 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 SOWAHDA6NJG2 315 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 HOXB7P09629 217 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 HHATQ5VTY9 493 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 MCUR1Q96AQ8 359 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 ANAPC4Q9UJX5 808 aa16.98■□□□□ 0.31
SHROOM4-201ENST00000289292 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 FGAP02671 866 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 TBC1D31Q96DN5 1066 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 HAUS7Q99871 368 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 FAM114A2Q9NRY5 505 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 SYNMO15061 1565 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 CSRNP2Q9H175 543 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 CCDC51Q96ER9 411 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 PEX19P40855 299 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 TPD52P55327 224 aaPredicted RBP16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 SLC39A2Q9NP94 309 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 HYOU1Q9Y4L1 999 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 FRMPD2Q68DX3 1309 aaPredicted RBP16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 KRIT1O00522 736 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 UFL1O94874 794 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 TFAP4Q01664 338 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 TRIM58Q8NG06 486 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 FAM71BQ8TC56 605 aa16.97■□□□□ 0.31
SHROOM4-201ENST00000289292 SEPT6Q14141 434 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 CAPN12Q6ZSI9 719 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 KRT15P19012 456 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 NAA35Q5VZE5 725 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms