RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 BRF1Q92994 677 aa4.84□□□□□ -1.63
NCOA1-201ENST00000288599 OSBPL10Q9BXB5 764 aa4.84□□□□□ -1.63
NCOA1-201ENST00000288599 UPF3BQ9BZI7 483 aaKnown RBP4.84□□□□□ -1.63
NCOA1-201ENST00000288599 AS3MTQ9HBK9 375 aa4.84□□□□□ -1.63
NCOA1-201ENST00000288599 GEMIN8Q9NWZ8 242 aaKnown RBP4.84□□□□□ -1.63
NCOA1-201ENST00000288599 CTTNBP2NLQ9P2B4 639 aa4.84□□□□□ -1.63
NCOA1-201ENST00000288599 MAP3K4Q9Y6R4 1608 aa4.84□□□□□ -1.63
NCOA1-201ENST00000288599 F8W031 263 aaPredicted RBP4.84□□□□□ -1.64
NCOA1-201ENST00000288599 CASQ2O14958 399 aaPredicted RBP4.84□□□□□ -1.64
NCOA1-201ENST00000288599 ZBED4O75132 1171 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 PTPREP23469 700 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 HSPA4P34932 840 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 PTPN14Q15678 1187 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 DDB1Q16531 1140 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 TTBK2Q6IQ55 1244 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 APPL2Q8NEU8 664 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 SETDB2Q96T68 719 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 SCAND2PQ9GZW5 306 aaPredicted RBP4.84□□□□□ -1.64
NCOA1-201ENST00000288599 SUCLA2Q9P2R7 463 aaPredicted RBP4.84□□□□□ -1.64
NCOA1-201ENST00000288599 PCDHGB3Q9Y5G1 929 aa4.84□□□□□ -1.64
NCOA1-201ENST00000288599 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 PPFIA4O75335 1185 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 PHBP35232 272 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 GJC1P36383 396 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 GADL1Q6ZQY3 521 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TAS1R3Q7RTX0 852 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC13Q8IYE1 715 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC155Q8N6L0 562 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TEX9Q8N6V9 391 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM7Q9C029 511 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SIL1Q9H173 461 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 RBSNQ9H1K0 784 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CPSF3Q9UKF6 684 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SUGT1Q9Y2Z0 365 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 RPGRIP1LQ68CZ1 1315 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 P4HA1P13674 534 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 LSP1P33241 339 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 MTHFSP49914 203 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 PUM3Q15397 648 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 IFI16Q16666 785 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SLC9C1Q4G0N8 1177 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 DTHD1Q6ZMT9 781 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 BRINP3Q76B58 766 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SELENOSQ9BQE4 189 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CATSPERZQ9NTU4 200 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 EDARQ9UNE0 448 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 H0YIN7 160 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CTAGE8P0CG41 777 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 UBA1P22314 1058 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 IFRD2Q12894 506 aaPredicted RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC84Q86UT8 332 aaPredicted RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CTAGE4Q8IX94 777 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CACNA2D3Q8IZS8 1091 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SPATA5Q8NB90 893 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SSH3Q8TE77 659 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 WDR60Q8WVS4 1066 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 VPS50Q96JG6 964 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 KCNS3Q9BQ31 491 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TUBGCP2Q9BSJ2 902 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 RABEP2Q9H5N1 569 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 PAPOLBQ9NRJ5 636 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 AKAP2Q9Y2D5 859 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 ABCC3O15438 1527 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC196A0A1B0GTZ2 297 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 MTSS1O43312 755 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 YARSP54577 528 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 MCM6Q14566 821 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 ZNF804AQ7Z570 1209 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 PPP1R12CQ9BZL4 782 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SNX6Q9UNH7 406 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 USP19O94966 1318 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 GPC4O75487 556 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TDP2O95551 362 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 MPOP05164 745 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 IVLP07476 585 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 MYBL2P10244 700 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC15Q0P6D6 951 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TDRD12Q587J7 1177 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SH2D4BQ5SQS7 431 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 OOSP2Q86WS3 158 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 C10orf67Q8IYJ2 551 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 POMGNT1Q8WZA1 660 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 VMP1Q96GC9 406 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 COG4Q9H9E3 785 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 VAT1LQ9HCJ6 419 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 RAD18Q9NS91 495 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 RUVBL2Q9Y230 463 aaKnown RBP4.83□□□□□ -1.64
NCOA1-201ENST00000288599 ATP8B3O60423 1300 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM64A6NGJ6 449 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 ANXA13P27216 316 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 SNX1Q13596 522 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 KIAA0753Q2KHM9 967 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 WDR44Q5JSH3 913 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC30Q5VVM6 783 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 ANKS6Q68DC2 871 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TPTE2Q6XPS3 522 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 TAOK1Q7L7X3 1001 aa4.83□□□□□ -1.64
NCOA1-201ENST00000288599 EXOC8Q8IYI6 725 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms