RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TIGD1Q96MW7 591 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 OCSTAMPQ9BR26 566 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 EMILIN2Q9BXX0 1053 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 NCOA5Q9HCD5 579 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 ZFATQ9P243 1243 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 ZNRF3Q9ULT6 936 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PCDHA4Q9UN74 947 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PCDHB14Q9Y5E9 798 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PRAG1Q86YV5 1406 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 VPS8Q8N3P4 1428 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 KIAA1107Q9UPP5 1409 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 NUP153P49790 1475 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 NCOA2Q15596 1464 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 MBD4O95243 580 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PGRP06401 933 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 LDHCP07864 332 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 NAP1L1P55209 391 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 SLC7A5Q01650 507 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 CCDC84Q86UT8 332 aaPredicted RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 MPP4Q96JB8 637 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SSU72Q9NP77 194 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 SEC31BQ9NQW1 1179 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 RAD18Q9NS91 495 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SUCOQ9UBS9 1254 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 MRPS23Q9Y3D9 190 aaKnown RBP3.27□□□□□ -1.89
CHD1-201ENST00000284049 ADGRL2O95490 1459 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 CAMSAP2Q08AD1 1489 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PLXNC1O60486 1568 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 PMM2O15305 246 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 ZEB2O60315 1214 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SASH3O75995 380 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 C4orf48Q5BLP8 95 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 CLEC4GQ6UXB4 293 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 MMS22LQ6ZRQ5 1243 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 NYAP1Q6ZVC0 841 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SKAP1Q86WV1 359 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SLITRK4Q8IW52 837 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 SULF2Q8IWU5 870 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 GRIN3AQ8TCU5 1115 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 KCTD13Q8WZ19 329 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 FERMT2Q96AC1 680 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 TM9SF2Q99805 663 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 REV1Q9UBZ9 1251 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 ZBTB21Q9ULJ3 1066 aa3.27□□□□□ -1.89
CHD1-201ENST00000284049 HIP1RO75146 1068 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CFBP00751 764 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 DDIT3P35638 169 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 GIPRP48546 466 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 FNDC3BQ53EP0 1204 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 ACBD5Q5T8D3 534 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 RC3H1Q5TC82 1133 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 NECAB2Q7Z6G3 386 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 THNSL2Q86YJ6 484 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 KCTD12Q96CX2 325 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 RNF38Q9H0F5 515 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 TIMMDC1Q9NPL8 285 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 PNMA8BQ9ULN7 279 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 MIA2Q96PC5 1412 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 NEO1Q92859 1461 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SPDYE3A6NKU9 549 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 NAT1P18440 290 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CCNJLQ8IV13 435 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SUGP1Q8IWZ8 645 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 SLC4A5Q9BY07 1137 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 OBP2AQ9NY56 170 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CYP8B1Q9UNU6 501 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 FRMD4BQ9Y2L6 1034 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 PTPN23Q9H3S7 1636 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 TIAM1Q13009 1591 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 DIP2BQ9P265 1576 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 A0A096LPE4 126 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 A0A1W2PPZ6 126 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 AP1G1O43747 822 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SMNDC1O75940 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD1-201ENST00000284049 RECQLP46063 649 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 ARL4DP49703 201 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 ST5P78524 1137 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 MAP7Q14244 749 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CBX2Q14781 532 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 MTFR1Q15390 333 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 AKAP4Q5JQC9 854 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 TDRD10Q5VZ19 366 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 PKN3Q6P5Z2 889 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 RIPOR1Q6ZS17 1223 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 COG1Q8WTW3 980 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 MARVELD3Q96A59 401 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 PKNOX2Q96KN3 472 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SPATA17Q96L03 361 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SUSD3Q96L08 255 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CORO1BQ9BR76 489 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 ANKRD6Q9Y2G4 727 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 RIMBP3CA6NJZ7 1639 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 RIMBP3BA6NNM3 1639 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 RIMBP3Q9UFD9 1639 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 TTC24A2A3L6 582 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 GSG1L2A8MUP6 293 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 ERC2O15083 957 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 PQBP1O60828 265 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 PTGIRP43119 386 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms