RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NOC4LQ9BVI4 516 aaKnown RBP5.86□□□□□ -1.47
CD44-202ENST00000278385 CCDC86Q9H6F5 360 aaKnown RBP5.86□□□□□ -1.47
CD44-202ENST00000278385 DDX41Q9UJV9 622 aaKnown RBP5.86□□□□□ -1.47
CD44-202ENST00000278385 PCF11O94913 1555 aaKnown RBP5.85□□□□□ -1.47
CD44-202ENST00000278385 TRAPPC8Q9Y2L5 1435 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 SPAG9O60271 1321 aaKnown RBP5.85□□□□□ -1.47
CD44-202ENST00000278385 CCER2I3L3R5 266 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 TIAF1O95411 115 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 RPS26P62854 115 aaKnown RBP5.85□□□□□ -1.47
CD44-202ENST00000278385 MAP3K11Q16584 847 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 MAP9Q49MG5 647 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 NKAPLQ5M9Q1 402 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 NBPF6Q5VWK0 638 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 HDXQ7Z353 690 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 AMOTL1Q8IY63 956 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 PRPF38AQ8NAV1 312 aaKnown RBP5.85□□□□□ -1.47
CD44-202ENST00000278385 IL17RAQ96F46 866 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 NBPF4Q96M43 638 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 FAM83CQ9BQN1 747 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 IER2Q9BTL4 223 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 WDR18Q9BV38 432 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 NRSN2Q9GZP1 204 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 ATG3Q9NT62 314 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 RNF19AQ9NV58 838 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 PCDHA4Q9UN74 947 aa5.85□□□□□ -1.47
CD44-202ENST00000278385 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 PLEKHH2Q8IVE3 1493 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 ECEL1O95672 775 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 DLGAP3O95886 979 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 CELA3AP09093 270 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 FSTP19883 344 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 RACK1P63244 317 aaKnown RBP5.84□□□□□ -1.47
CD44-202ENST00000278385 KIF4BQ2VIQ3 1234 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 TRIM42Q8IWZ5 723 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 ARMC10Q8N2F6 343 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 C2CD4AQ8NCU7 369 aaPredicted RBP5.84□□□□□ -1.47
CD44-202ENST00000278385 GPBAR1Q8TDU6 330 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 FBLIM1Q8WUP2 373 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 SWAP70Q9UH65 585 aa5.84□□□□□ -1.47
CD44-202ENST00000278385 FBXO9Q9UK97 447 aaPredicted RBP5.84□□□□□ -1.47
CD44-202ENST00000278385 VPS8Q8N3P4 1428 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 USP31Q70CQ4 1352 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 ADAM23O75077 832 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 BPNT1O95861 308 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 IGLV1-40P01703 118 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 TSPY4P0CV99 314 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 TSPY10P0CW01 314 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 GRIK1P39086 918 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 CYP27A1Q02318 531 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 MYBPC2Q14324 1141 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 DHX8Q14562 1220 aaKnown RBP5.83□□□□□ -1.48
CD44-202ENST00000278385 SGO2Q562F6 1265 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 PRSS36Q5K4E3 855 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 MEI1Q5TIA1 1274 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 DUSP27Q5VZP5 1158 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 RNF43Q68DV7 783 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 PDZD3Q86UT5 571 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 CKAP2LQ8IYA6 745 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 KCT2Q8NC54 265 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 DBNDD2Q9BQY9 259 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.83□□□□□ -1.48
CD44-202ENST00000278385 SLKQ9H2G2 1235 aaPredicted RBP5.83□□□□□ -1.48
CD44-202ENST00000278385 C7orf69Q9H7B7 122 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 THRAP3Q9Y2W1 955 aaKnown RBP5.83□□□□□ -1.48
CD44-202ENST00000278385 DAGLAQ9Y4D2 1042 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 ACTL7BQ9Y614 415 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
CD44-202ENST00000278385 RICTORQ6R327 1708 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 ADAMTSL3P82987 1691 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 ZNF644Q9H582 1327 aaPredicted RBP5.82□□□□□ -1.48
CD44-202ENST00000278385 HMX2A2RU54 273 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 KIF3BO15066 747 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 PAGE1O75459 146 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 CTSBP07858 339 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 ATF4P18848 351 aaPredicted RBP5.82□□□□□ -1.48
CD44-202ENST00000278385 BMP6P22004 513 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 GBP2P32456 591 aaPredicted RBP5.82□□□□□ -1.48
CD44-202ENST00000278385 LIG3P49916 1009 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 ERVK-24P63145 666 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 NFIAQ12857 509 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 ZNF394Q53GI3 561 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 HS2ST1Q7LGA3 356 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 PCGF5Q86SE9 256 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 FERMT3Q86UX7 667 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 SMYD4Q8IYR2 804 aaPredicted RBP5.82□□□□□ -1.48
CD44-202ENST00000278385 GRIN3AQ8TCU5 1115 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 APBA2Q99767 749 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 METTL22Q9BUU2 404 aaPredicted RBP5.82□□□□□ -1.48
CD44-202ENST00000278385 OSBPL1AQ9BXW6 950 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 CRIM1Q9NZV1 1036 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 PCOLCE2Q9UKZ9 415 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 EID1Q9Y6B2 187 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 MYO5CQ9NQX4 1742 aa5.82□□□□□ -1.48
CD44-202ENST00000278385 KDM5CP41229 1560 aa5.81□□□□□ -1.48
CD44-202ENST00000278385 ABCC1P33527 1531 aa5.81□□□□□ -1.48
CD44-202ENST00000278385 SCO2A0A1W2PP80 73 aa5.81□□□□□ -1.48
CD44-202ENST00000278385 TMPRSS2O15393 492 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms