RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 NUP88Q99567 741 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 GJA3Q9Y6H8 435 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 USP27XA6NNY8 438 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PPARDQ03181 441 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 EYA3Q99504 573 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TPM3P06753 285 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TXKP42681 527 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 STX1AQ16623 288 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 NAT10Q9H0A0 1025 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 EPC1Q9H2F5 836 aa16.05■□□□□ 0.16
TNFRSF11A-201ENST00000269485 GRAPQ13588 217 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 MNS1Q8NEH6 495 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 DDR1Q08345 913 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 EARS2Q5JPH6 523 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PHLPP1O60346 1717 aa16.04■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 MMRN2Q9H8L6 949 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SKILP12757 684 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PLEKHA4Q9H4M7 779 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CD209Q9NNX6 404 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TMEM87BQ96K49 555 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PTGDRQ13258 359 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 BMS1Q14692 1282 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 NOSTRINQ8IVI9 506 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CDK5RAP3Q96JB5 506 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 GNAT2P19087 354 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 UBASH3AP57075 661 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PLS1Q14651 629 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 AOC3Q16853 763 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SPTLC3Q9NUV7 552 aa16.02■□□□□ 0.16
TNFRSF11A-201ENST00000269485 UBA7P41226 1012 aa16.02■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CPXCR1Q8N123 301 aa16.02■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.15
TNFRSF11A-201ENST00000269485 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 VPS16Q9H269 839 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TDRD3Q9H7E2 651 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 FANCLQ9NW38 375 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KLRF2D3W0D1 207 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KRT18P05783 430 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KRT2P35908 639 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ADKP55263 362 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RBM6P78332 1123 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 UBE2SQ16763 222 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TMCO3Q6UWJ1 677 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SMARCE1Q969G3 411 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PPIP5K2O43314 1243 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CHMP2AO43633 222 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 NRDCO43847 1150 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 XDHP47989 1333 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 MORC2Q9Y6X9 1032 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ADAMTS3O15072 1205 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms