RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 WNT10BO00744 389 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 SMARCA1P28370 1054 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 EIF6P56537 245 aaKnown RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 SLC35G1Q2M3R5 365 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 CERKLQ49MI3 558 aaPredicted RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 FHDC1Q9C0D6 1143 aaPredicted RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 FOXP1Q9H334 677 aaPredicted RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 BAZ2BQ9UIF8 2168 aaKnown RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 SHTN1A0MZ66 631 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 FAM196BA6NMK8 535 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 XBP1P17861 261 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 SAFBQ15424 915 aaKnown RBP eCLIP18.92■□□□□ 0.62
TPM1-201ENST00000267996 PFKFB3Q16875 520 aaPredicted RBP18.92■□□□□ 0.62
TPM1-201ENST00000267996 CSRNP1Q96S65 589 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 SPZ1Q9BXG8 430 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 PGAP2Q9UHJ9 254 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 KCNJ14Q9UNX9 436 aa18.92■□□□□ 0.62
TPM1-201ENST00000267996 hCG_1642624A0A1W2PR95 340 aa18.91■□□□□ 0.62
TPM1-201ENST00000267996 PARP1P09874 1014 aaKnown RBP18.91■□□□□ 0.62
TPM1-201ENST00000267996 SCG2P13521 617 aa18.91■□□□□ 0.62
TPM1-201ENST00000267996 NASPP49321 788 aaPredicted RBP18.91■□□□□ 0.62
TPM1-201ENST00000267996 DIS3L2Q8IYB7 885 aaKnown RBP18.91■□□□□ 0.62
TPM1-201ENST00000267996 MKL1Q969V6 931 aa18.91■□□□□ 0.62
TPM1-201ENST00000267996 PGBD1Q96JS3 809 aa18.91■□□□□ 0.62
TPM1-201ENST00000267996 TRIM34Q9BYJ4 488 aa18.91■□□□□ 0.62
TPM1-201ENST00000267996 FTOQ9C0B1 505 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM1-201ENST00000267996 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 CYTH3O43739 400 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 MYO1BO43795 1136 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 PDHBP11177 359 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 GMPSP49915 693 aaPredicted RBP18.9■□□□□ 0.62
TPM1-201ENST00000267996 NBPF9Q3BBW0 867 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 NOSTRINQ8IVI9 506 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 VPS54Q9P1Q0 977 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 NYAP2Q9P242 653 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
TPM1-201ENST00000267996 DICER1Q9UPY3 1922 aaKnown RBP18.9■□□□□ 0.62
TPM1-201ENST00000267996 KLRF2D3W0D1 207 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.61
TPM1-201ENST00000267996 YEATS4O95619 227 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 ZNF445P59923 1031 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 ZSCAN23Q3MJ62 389 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 USP17L2Q6R6M4 530 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 TMEM179Q6ZVK1 233 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 KANSL2Q9H9L4 492 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 FSD2A1L4K1 749 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 USP17L5A8MUK1 530 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 TBC1D12O60347 775 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 NPY5RQ15761 445 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 ASPRV1Q53RT3 343 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 RASGRP2Q7LDG7 609 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 LRRC47Q8N1G4 583 aaKnown RBP18.89■□□□□ 0.61
TPM1-201ENST00000267996 LINC00301Q8NCQ3 95 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
TPM1-201ENST00000267996 VEZTQ9HBM0 779 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 CLIC4Q9Y696 253 aa18.89■□□□□ 0.61
TPM1-201ENST00000267996 ZNF541Q9H0D2 1346 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
TPM1-201ENST00000267996 LMNB1P20700 586 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 MAP3K10Q02779 954 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 CEBPZQ03701 1054 aaKnown RBP18.88■□□□□ 0.61
TPM1-201ENST00000267996 GNL2Q13823 731 aaKnown RBP18.88■□□□□ 0.61
TPM1-201ENST00000267996 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 ANO1Q5XXA6 986 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 SIAH1Q8IUQ4 282 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 FAM177A1Q8N128 213 aaPredicted RBP18.88■□□□□ 0.61
TPM1-201ENST00000267996 SH3GLB2Q9NR46 395 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 MYH4Q9Y623 1939 aa18.88■□□□□ 0.61
TPM1-201ENST00000267996 GOLGA8HP0CJ92 632 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 RRP1BQ14684 758 aaKnown RBP18.87■□□□□ 0.61
TPM1-201ENST00000267996 SHROOM1Q2M3G4 852 aaPredicted RBP18.87■□□□□ 0.61
TPM1-201ENST00000267996 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 OXER1Q8TDS5 423 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 RIOX1Q9H6W3 641 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
TPM1-201ENST00000267996 ISY1Q9ULR0 285 aaKnown RBP18.87■□□□□ 0.61
TPM1-201ENST00000267996 MTMR7Q9Y216 660 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 GJA3Q9Y6H8 435 aa18.87■□□□□ 0.61
TPM1-201ENST00000267996 EGFRP00533 1210 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
TPM1-201ENST00000267996 DEKP35659 375 aaKnown RBP18.86■□□□□ 0.61
TPM1-201ENST00000267996 JAG1P78504 1218 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 SEPT2Q15019 361 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 KCNG4Q8TDN1 519 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 TMEM39BQ9GZU3 492 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
TPM1-201ENST00000267996 SBF1O95248 1867 aa18.86■□□□□ 0.61
TPM1-201ENST00000267996 GOLGA6L4A6NEF3 574 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 KRT2P35908 639 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 ZNF543Q08ER8 600 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 NR5A1Q13285 461 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 CCDC183Q5T5S1 534 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms